PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe3G179900.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

NAC

Protein Properties

Length: 398aa MW: 44536.4 Da PI: 4.5773

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe3G179900.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	31.5	5.2e-10	7	76	1	69
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykve...PwdLpkkvkaeekewyfFskrdkkya 69 lppGfrF Ptdeel+++yL+kkv g+ +l+++i+e +y e P +L a+++ ++ F ++++++ Aqcoe3G179900.1.p 7 LPPGFRFCPTDEELIKFYLHKKVIGEAlpDQLNNFIAEKVLYGDEavvPPQLF----AGRSFTFIFNDQHQQQE 76 79*********************999954455556777666654411144442....33344455555555444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.44E-16	3	112	IPR003441	NAC domain
Pfam	PF02365	1.7E-8	8	93	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence Send to blast
MKRMMRLPPG FRFCPTDEEL IKFYLHKKVI GEALPDQLNN FIAEKVLYGD EAVVPPQLFA 60 GRSFTFIFND QHQQQENYYK KKSISWIMHE FTLPSSSQHH QSTQWTVCKI RKMVSADAKR 120 KYDLIPTPAS SVQGRHKRAR KFSNELLSLQ STTPTPSTKT SDVRFSNDDN YLPSGLAVNV 180 MPLDHQQEQK RDYYNNGTQP DTISYQLPDP CTSAVGTSSI IPAEKSLNVP ECSQPLQSDY 240 ASPSNHYVAT QPDHEGAYND NELSFSLNEL FGELPPLEEE SEDDVYPLNK GQNLIESQTD 300 SISYQLADTC TPEVATLSII SETVLNLPQY SQPVQSDNDA SSNVAAQPDH GGAYNDNEIY 360 SHLDDFAANL LTLGEDDVFD SLNKGPNFMG MLLAACR*

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence Send to blast

MKRMMRLPPG FRFCPTDEEL IKFYLHKKVI GEALPDQLNN FIAEKVLYGD EAVVPPQLFA  60
GRSFTFIFND QHQQQENYYK KKSISWIMHE FTLPSSSQHH QSTQWTVCKI RKMVSADAKR  120
KYDLIPTPAS SVQGRHKRAR KFSNELLSLQ STTPTPSTKT SDVRFSNDDN YLPSGLAVNV  180
MPLDHQQEQK RDYYNNGTQP DTISYQLPDP CTSAVGTSSI IPAEKSLNVP ECSQPLQSDY  240
ASPSNHYVAT QPDHEGAYND NELSFSLNEL FGELPPLEEE SEDDVYPLNK GQNLIESQTD  300
SISYQLADTC TPEVATLSII SETVLNLPQY SQPVQSDNDA SSNVAAQPDH GGAYNDNEIY  360
SHLDDFAANL LTLGEDDVFD SLNKGPNFMG MLLAACR*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G5CGE5	8e-51	A0A2G5CGE5_AQUCA; Uncharacterized protein
STRING	Aquca_056_00045.1	1e-51	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52890.1	2e-09	NAC domain containing protein 19

Link Out ? help Back to Top
Phytozome	Aqcoe3G179900.1.p