PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G071400.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bZIP
Protein Properties Length: 192aa    MW: 22391.8 Da    PI: 5.3199
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G071400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.63.7e-1578136563
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        +++rr+++NRe+ArrsR RK++ ++eL   v  L +eN++L+++l+  ++  +++ +e+
  Aqcoe3G071400.1.p  78 RKQRRMISNRESARRSRMRKQKHLDELYSQVIRLRTENRQLIDKLNDVTDSHDQVLQEN 136
                        79***********************************************9999999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.2E-1674138IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.17476139IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.48E-1278128No hitNo description
PfamPF001701.9E-1378136IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.2E-1278151No hitNo description
CDDcd147021.33E-1979130No hitNo description
PROSITE patternPS0003608196IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MQQGELAGFG YITPVDPTSY SIHMESNLPT FPFGTFLRPS SHYHVPTQIN EFTHQPCLSN  60
NSTSDEAEEQ QLNIIDERKQ RRMISNRESA RRSRMRKQKH LDELYSQVIR LRTENRQLID  120
KLNDVTDSHD QVLQENTRLK EETSELRQIL NDMQLDNSYD DFRDLEVPCN TAHLRAEYSK  180
EPISSSIDLL H*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19097RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00389DAPTransfer from AT3G30530Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010257863.12e-74PREDICTED: basic leucine zipper 43-like
SwissprotQ9FMC29e-38BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A2G5EPB41e-139A0A2G5EPB4_AQUCA; Uncharacterized protein
STRINGAquca_006_00360.11e-140(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.14e-50basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]