PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe3G043800.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | GeBP | ||||||||
Protein Properties | Length: 206aa MW: 23723.1 Da PI: 10.4031 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 119.6 | 1.7e-37 | 72 | 171 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk....spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkif 89 lfqrlw++eDei lLqG++++++++g +++di fy+++k++++++++k+qlveK+rrLKkKf++ +++++sgk+++f+++hdq +f Aqcoe3G043800.1.p 72 LFQRLWTDEDEIGLLQGFLEYTSQRGGfknsAYHHDIAPFYDQIKSKLQLDFNKNQLVEKLRRLKKKFRNVMSRINSGKDFNFKTPHDQATF 163 79***********************9777756677********************************************************* PP DUF573 90 elskkiWg 97 e+s+kiW Aqcoe3G043800.1.p 164 EISRKIWS 171 *******6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 4.6E-35 | 73 | 171 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence Send to blast |
MDRNYLNVTG PNRTKYNRSG FDHKRQRITM STTTTTTTST IPIIPTTVSV PISTPIHEEE 60 KKPLAFDDSR RLFQRLWTDE DEIGLLQGFL EYTSQRGGFK NSAYHHDIAP FYDQIKSKLQ 120 LDFNKNQLVE KLRRLKKKFR NVMSRINSGK DFNFKTPHDQ ATFEISRKIW SGIAAETGWS 180 LSLNLLCLCL CLRSEKATRR TMGVA* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010241430.1 | 3e-66 | PREDICTED: probable transcription factor At3g04930 | ||||
Swissprot | Q9CAV7 | 2e-50 | STKLJ_ARATH; Probable transcription factor At3g04930 | ||||
TrEMBL | A0A2G5D822 | 1e-152 | A0A2G5D822_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_026_00251.1 | 1e-153 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04930.2 | 5e-51 | DNA-binding storekeeper protein-related transcriptional regulator |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe3G043800.1.p |