PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G082800.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 332aa    MW: 37305.7 Da    PI: 4.6324
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G082800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.59.1e-2061109153
                AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 
                        + y+GVr++  +g+WvAeIr+p+   k kr +lg+f+ta eAaka+++a+  +
  Aqcoe2G082800.1.p  61 CNYRGVRQRT-WGKWVAEIREPN---KGKRLWLGTFDTAIEAAKAYDEAAWTM 109
                        56*****999.**********93...25*********************9555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008479.6E-1461111IPR001471AP2/ERF domain
CDDcd000181.24E-3261120No hitNo description
PROSITE profilePS5103221.91862119IPR001471AP2/ERF domain
SMARTSM003805.0E-3462127IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.9E-3062120IPR001471AP2/ERF domain
SuperFamilySSF541713.01E-2162119IPR016177DNA-binding domain
PRINTSPR003673.2E-106374IPR001471AP2/ERF domain
PRINTSPR003673.2E-1085101IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009737Biological Processresponse to abscisic acid
GO:0010286Biological Processheat acclimation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MCMSYERKKR SRSGGDVAET LAKWKELHNM NNGSKVINKV PAKGSKKGCM RGKGGPENVN  60
CNYRGVRQRT WGKWVAEIRE PNKGKRLWLG TFDTAIEAAK AYDEAAWTMY GTCARLNLPE  120
FIGLNSSSSA DLVESSESME SKEFISCPFI KKSEDLKNYI VDAKTENGEV EQIVKVEPKC  180
GQVINCMPNS IDETVMTKDY VKREYPEEVD SLQSNNVAGF GTEQDNSQDI MIDIEELLGQ  240
IGYYNDSPPK DFVAMMQNST DMDSCQPGST CSDEPQSRPQ PSELRDQLQN PAWNVEQANP  300
DYESVWNVEQ ASRINSYNFL KQNSAQLDYL I*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-1862119260ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
5wx9_A2e-18601271280Ethylene-responsive transcription factor ERF096
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00302DAPTransfer from AT2G40340Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5EV230.0A0A2G5EV23_AQUCA; Uncharacterized protein
STRINGAquca_004_00452.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.15e-38ERF family protein