PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G051600.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family WRKY
Protein Properties Length: 719aa    MW: 80005.5 Da    PI: 6.505
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G051600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY82.64.1e-26322375559
                        S-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   5 ynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                         + rKYG K+vkgs fprsYY+Ct+++C+vkkk+ers+ d++++ei+Y+g Hnh+
  Aqcoe2G051600.1.p 322 TCDRKYGEKQVKGSAFPRSYYKCTYQNCQVKKKIERSH-DGQITEIIYKGGHNHS 375
                        455***********************************.***************8 PP
2WRKY95.14.7e-30508562155
                        ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES- CS
               WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYege 55 
                        ldDgy+WrKYGqK+vkg+++prsYY+Cts gC+v+k+ver+++dpk++++tYeg+
  Aqcoe2G051600.1.p 508 LDDGYRWRKYGQKHVKGNPNPRSYYKCTSDGCSVRKHVERASHDPKCLITTYEGN 562
                        59***************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.80.10.102.1E-745201IPR032675Leucine-rich repeat domain, L domain-like
SuperFamilySSF520581.46E-946200IPR032675Leucine-rich repeat domain, L domain-like
PROSITE profilePS5081119.37313377IPR003657WRKY domain
Gene3DG3DSA:2.20.25.807.9E-22314377IPR003657WRKY domain
SuperFamilySSF1182908.5E-20317377IPR003657WRKY domain
SMARTSM007742.0E-25319376IPR003657WRKY domain
PfamPF031061.0E-18325374IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.1E-32493562IPR003657WRKY domain
SuperFamilySSF1182901.44E-24501561IPR003657WRKY domain
PROSITE profilePS5081131.777503561IPR003657WRKY domain
SMARTSM007748.5E-32508564IPR003657WRKY domain
PfamPF031065.8E-23509562IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 719 aa     Download sequence    Send to blast
MDLKIFALVN KSKLEVLGYD LQTESDIEVM IVLVYNSQKF GGGAKFPSWI GEPLFTKLTN  60
ITIHDRRNCK VLPPLGQLPS LESLCISDMH PIKVIDHHFC ARNMGMESLD SDRLELGTTS  120
EYMSTASMFN VFPALKNLTI NGMPMLNGVE WKKLTALPKL SHLKFLKKLE ICLNPSLQCF  180
SKEGLPTLLQ YLVIINCQFL KEKCLYDEEE YWQKFGDIPN IWIDYQQMTK VSSASNQTQN  240
VEVADASHHS PAPVQAQADI ECQAGLLKQT MIKNYATGSP PTIEDATNMV VDSNYLPLRT  300
FDTGAASEQA PQLEEQVHVD DTCDRKYGEK QVKGSAFPRS YYKCTYQNCQ VKKKIERSHD  360
GQITEIIYKG GHNHSMPQPS RRSAHESYVD VEGGSAWRSI PQGSKDSKVA SDWRSYGLET  420
TSSTSVLPEV SYPFFTAKGK QLGIVESADT PELSSTLVSL SLGDDADDDD SESKRRRKDS  480
CLIGANMTSR AVRKPRVVVQ TDSEVEILDD GYRWRKYGQK HVKGNPNPRS YYKCTSDGCS  540
VRKHVERASH DPKCLITTYE GNTIVSTLSS PFRSPYLTIP PGLSPTSLLD SPAMLPCSQP  600
RQCHVSLTVW VLNGRDNRVG TVAIKYGFSS KGTLAQPSPT TGTLPESCYT ILATCNVEKD  660
KDDGVDSSFM FKPHPISFQY HPELPKVASQ DEQSHSTKPP VGTGTPPEHD DWLDCTET*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-28499561870Probable WRKY transcription factor 4
2lex_A2e-28499561870Probable WRKY transcription factor 4
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5EWE30.0A0A2G5EWE3_AQUCA; Uncharacterized protein
STRINGAquca_004_00724.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.13e-61WRKY family protein