PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G503300.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family WRKY
Protein Properties Length: 332aa    MW: 36974.2 Da    PI: 5.4157
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G503300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY80.41.9e-25134194259
                        --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                        +Dgy+WrKYGqKe+ ++++pr+Y+rCt++   gC+++k+v++++edp + ++tY g+H+++
  Aqcoe1G503300.1.p 134 EDGYAWRKYGQKEILNTNHPRNYFRCTHKfdqGCQATKQVQKTDEDPPMYQTTYMGHHTCT 194
                        8***************************9999***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.7E-27124196IPR003657WRKY domain
SuperFamilySSF1182902.09E-25127195IPR003657WRKY domain
PROSITE profilePS5081121.287128196IPR003657WRKY domain
SMARTSM007742.5E-37133195IPR003657WRKY domain
PfamPF031067.0E-25134193IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009862Biological Processsystemic acquired resistance, salicylic acid mediated signaling pathway
GO:0009864Biological Processinduced systemic resistance, jasmonic acid mediated signaling pathway
GO:0010200Biological Processresponse to chitin
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MECSSFSESL SIIDRKKVVG ELIEGRELAS QLQLLIQNKK PLQDHEIVKM DTTVTKILQS  60
FGNVLSILDS GEMTGGDVCN SPMTTQASSP FSDDLKSVDS NDKRKIPAVK DRRGGYKRRK  120
SPNTWARISS KPTEDGYAWR KYGQKEILNT NHPRNYFRCT HKFDQGCQAT KQVQKTDEDP  180
PMYQTTYMGH HTCTDPLKPP QLILDPTSPP PNSNSVFNFE SNSTVTSSTQ DYHPIFSSFP  240
SFKLEYEQNY KPSTDRQLSS SNQFILSPEL SALDSSGPTT MSGSDHGDVI SGAYSCTTSS  300
EKLELDLVLG SIDFDDVFSF DEEGMMHVKS V*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-24131193668OsWRKY45
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102119KRKIPAVKDRRGGYKRRK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00408DAPTransfer from AT3G56400Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5D5R00.0A0A2G5D5R0_AQUCA; Uncharacterized protein
STRINGAquca_027_00037.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-44WRKY DNA-binding protein 70