PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G484100.4.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family WRKY
Protein Properties Length: 499aa    MW: 54481.6 Da    PI: 9.5459
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G484100.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.98.8e-33197253360
                        -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
               WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                        DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers  d+++ ei+Y+geHnh+k
  Aqcoe1G484100.4.p 197 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSF-DGQIAEIVYKGEHNHSK 253
                        9***************************************.***************85 PP
2WRKY33.21e-10400420323
                        -SS-EEEEEEE--TT-SS-EE CS
               WRKY   3 DgynWrKYGqKevkgsefprs 23 
                        Dg++WrKYGqK+vkg+++pr 
  Aqcoe1G484100.4.p 400 DGFRWRKYGQKVVKGNPYPRT 420
                        9******************95 PP
3WRKY567.8e-184334731959
                        SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY  19 efprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                           rsYYrCts +C+v+k+ver+ +dp+++++tYeg+Hnhe
  Aqcoe1G484100.4.p 433 SSCRSYYRCTSIKCNVRKHVERAVDDPRAFITTYEGKHNHE 473
                        578*************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.6E-30182254IPR003657WRKY domain
SuperFamilySSF1182902.62E-26189254IPR003657WRKY domain
SMARTSM007749.4E-37195253IPR003657WRKY domain
PfamPF031062.7E-25197251IPR003657WRKY domain
PROSITE profilePS5081123.732197254IPR003657WRKY domain
Gene3DG3DSA:2.20.25.807.0E-31384475IPR003657WRKY domain
SuperFamilySSF1182901.57E-21392475IPR003657WRKY domain
PROSITE profilePS5081128.449393475IPR003657WRKY domain
SMARTSM007741.5E-32398474IPR003657WRKY domain
PfamPF031061.1E-6400420IPR003657WRKY domain
PfamPF031062.0E-12434473IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009957Biological Processepidermal cell fate specification
GO:0010214Biological Processseed coat development
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 499 aa     Download sequence    Send to blast
MEAQDGERIV IAKPVPSRPS SSSLNSVSGL LSGTISTSSP SSFSETAVAA IRPKTVRIKS  60
AAVNRASVAV VSSQGEASGT VGCYSSENTL NPEIKSSVVY KPLAKLVSSK TVHLLANLEN  120
FDVGHQYAVS QMQPQVQHAN NADHHLLPQH VSIPNENLPS QVKTNQTSES LQAASQNLDG  180
TQRAQISTMT GDRPSYDGYN WRKYGQKQVK GSEYPRSYYK CTHPNCPVKK KVERSFDGQI  240
AEIVYKGEHN HSKPQPPKRH SLGLQEQGLA SDVSGQETGN PSWSNSNTST VRSEGSERII  300
DYKNGSKLSV NPSYLGKATK PYDSAMFGAF NSSLVITDGS CGLNGDCDEG SKRICAEDNQ  360
PKLKRRKNDH QSNEVAMLGK GVQDPHVVVQ SSSDSEVFGD GFRWRKYGQK VVKGNPYPRT  420
TIPWWKIRDM GVSSCRSYYR CTSIKCNVRK HVERAVDDPR AFITTYEGKH NHERPTVGNL  480
NPVASDPDSA TPPNKGKQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A5e-27197475877Probable WRKY transcription factor 4
2lex_A5e-27197475877Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023893319.10.0WRKY transcription factor 44
RefseqXP_023893320.10.0WRKY transcription factor 44
TrEMBLA0A2G5D5G60.0A0A2G5D5G6_AQUCA; Uncharacterized protein
STRINGAquca_027_00161.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37260.14e-85WRKY family protein