PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe1G484100.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | WRKY | ||||||||
Protein Properties | Length: 482aa MW: 52463.2 Da PI: 9.4618 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 104 | 8.4e-33 | 197 | 253 | 3 | 60 |
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers d+++ ei+Y+geHnh+k Aqcoe1G484100.3.p 197 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSF-DGQIAEIVYKGEHNHSK 253 9***************************************.***************85 PP | |||||||
2 | WRKY | 103.1 | 1.5e-32 | 400 | 456 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+vkg+++prsYYrCts +C+v+k+ver+ +dp+++++tYeg+Hnhe Aqcoe1G484100.3.p 400 DGFRWRKYGQKVVKGNPYPRSYYRCTSIKCNVRKHVERAVDDPRAFITTYEGKHNHE 456 9*******************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 5.3E-30 | 182 | 254 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.48E-26 | 189 | 254 | IPR003657 | WRKY domain |
SMART | SM00774 | 9.4E-37 | 195 | 253 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.6E-25 | 197 | 251 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 23.732 | 197 | 254 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 1.6E-33 | 384 | 458 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.53E-28 | 392 | 458 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 34.44 | 393 | 458 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.5E-36 | 398 | 457 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.1E-25 | 400 | 456 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009957 | Biological Process | epidermal cell fate specification | ||||
GO:0010214 | Biological Process | seed coat development | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 482 aa Download sequence Send to blast |
MEAQDGERIV IAKPVPSRPS SSSLNSVSGL LSGTISTSSP SSFSETAVAA IRPKTVRIKS 60 AAVNRASVAV VSSQGEASGT VGCYSSENTL NPEIKSSVVY KPLAKLVSSK TVHLLANLEN 120 FDVGHQYAVS QMQPQVQHAN NADHHLLPQH VSIPNENLPS QVKTNQTSES LQAASQNLDG 180 TQRAQISTMT GDRPSYDGYN WRKYGQKQVK GSEYPRSYYK CTHPNCPVKK KVERSFDGQI 240 AEIVYKGEHN HSKPQPPKRH SLGLQEQGLA SDVSGQETGN PSWSNSNTST VRSEGSERII 300 DYKNGSKLSV NPSYLGKATK PYDSAMFGAF NSSLVITDGS CGLNGDCDEG SKRICAEDNQ 360 PKLKRRKNDH QSNEVAMLGK GVQDPHVVVQ SSSDSEVFGD GFRWRKYGQK VVKGNPYPRS 420 YYRCTSIKCN VRKHVERAVD DPRAFITTYE GKHNHERPTV GNLNPVASDP DSATPPNKGK 480 Q* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 4e-31 | 197 | 458 | 8 | 77 | Probable WRKY transcription factor 4 |
2lex_A | 4e-31 | 197 | 458 | 8 | 77 | Probable WRKY transcription factor 4 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023893319.1 | 0.0 | WRKY transcription factor 44 | ||||
Refseq | XP_023893320.1 | 0.0 | WRKY transcription factor 44 | ||||
TrEMBL | A0A2G5D5I8 | 0.0 | A0A2G5D5I8_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_027_00161.1 | 0.0 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37260.1 | 7e-90 | WRKY family protein |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe1G484100.3.p |