PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G429500.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family C2H2
Protein Properties Length: 412aa    MW: 46023.3 Da    PI: 9.2887
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G429500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.21.4e-05168191123
                        EEETTTTEEESSHHHHHHHHHH.T CS
            zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                        ++Cp Cg+ F    nL++H+++ H
  Aqcoe1G429500.1.p 168 FPCPTCGEIFHKTQNLENHQSVkH 191
                        89******************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5015710.221168196IPR007087Zinc finger, C2H2
PROSITE patternPS000280170191IPR007087Zinc finger, C2H2
SuperFamilySSF563992.88E-15194410No hitNo description
Gene3DG3DSA:3.90.228.103.6E-5205310IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene3DG3DSA:3.90.228.102.3E-5340410IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    Send to blast
MAMVRSFFFN TFVSFLVLVL FHLGCFIIFT SNDRSSSSKK RKISPYSRSN NNIPISSSSS  60
SSTSQSKLLK LSHSTSSSWS YFKRIFSFKS KKVIVDHENH IQIQTQTLTT DTSPTLEYSI  120
RSSIVSSVAT PDDHTIAGST PSRKRRARSI SDISLADHQS FPLRNDIFPC PTCGEIFHKT  180
QNLENHQSVK HAVSELFDGD SGKNIVKIIF MTSWNRKEKK NPNIHRILKI HNSAKILAKF  240
EEYREMVKSK AMMISARRRD ERCIADGNEL LRFHCATFLC NLGQNGNSSL CSQQYCSVCG  300
IIRSGFSTKM DGISTMSSSL KAHLAIPDDL EEEFAFMNVK RAMLVCRVVA GRIGSDQVEE  360
VFEKDESTGY DSVVGRGGSN GGTTSFRSDD EELLVFNPRA VLPCFAIVYS V*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010262797.11e-151PREDICTED: uncharacterized protein LOC104601227
TrEMBLA0A2G5CLI00.0A0A2G5CLI0_AQUCA; Uncharacterized protein
STRINGAquca_045_00013.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29660.13e-98C2H2 family protein