PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G390500.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family WRKY
Protein Properties Length: 983aa    MW: 108563 Da    PI: 5.8616
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G390500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY962.5e-30122179260
                        --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                        +DgynWrKYGqK++kg+efprsYY+C++++C+vkk+ve+s+ d+ +++++Y+g+H+h+k
  Aqcoe1G390500.1.p 122 EDGYNWRKYGQKHIKGNEFPRSYYKCSHPNCQVKKQVEQSQ-DGGITDVIYRGKHDHPK 179
                        7***************************************9.***************85 PP
2WRKY99.12.8e-31385441360
                        -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
               WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                        DgynWrKYGqK++kgsefprsYYrCt+++C+vkk++e+s+ d++v++i+Y+geHnh+k
  Aqcoe1G390500.1.p 385 DGYNWRKYGQKHIKGSEFPRSYYRCTHPNCQVKKQLECSQ-DGQVTDIVYKGEHNHPK 441
                        9**************************************9.***************85 PP
3WRKY93.71.4e-29632689260
                        --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                        +  y+WrKYGqK++kgsefprsYYrCt+++C+vk ++ers+ d++++ei+Y+g+H+h+k
  Aqcoe1G390500.1.p 632 ENAYHWRKYGQKNIKGSEFPRSYYRCTHPNCQVKMQLERSH-DGRIIEIIYKGKHDHPK 689
                        568**************************************.***************85 PP
4WRKY92.72.9e-29805863159
                        ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                        +dDgy+W+KYG+K vkg+ +pr+YYrC+  gC+vkk+ver+a++pk+v++tYeg+Hnh+
  Aqcoe1G390500.1.p 805 VDDGYRWQKYGRKIVKGNSNPRNYYRCSNGGCQVKKHVERAANNPKAVITTYEGKHNHD 863
                        59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.3E-27118180IPR003657WRKY domain
SuperFamilySSF1182901.44E-24120180IPR003657WRKY domain
SMARTSM007743.4E-34121179IPR003657WRKY domain
PfamPF031061.1E-24122178IPR003657WRKY domain
PROSITE profilePS5081122.653122180IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.8E-26370442IPR003657WRKY domain
PROSITE profilePS5081123.066378442IPR003657WRKY domain
SuperFamilySSF1182901.83E-24381442IPR003657WRKY domain
SMARTSM007742.7E-34383441IPR003657WRKY domain
PfamPF031065.6E-25385440IPR003657WRKY domain
PROSITE profilePS5081123.709626690IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.3E-26626690IPR003657WRKY domain
SuperFamilySSF1182903.92E-23627690IPR003657WRKY domain
SMARTSM007744.4E-31631689IPR003657WRKY domain
PfamPF031065.0E-22634688IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.4E-32790865IPR003657WRKY domain
SuperFamilySSF1182902.75E-26798865IPR003657WRKY domain
PROSITE profilePS5081133.373800865IPR003657WRKY domain
SMARTSM007742.7E-32805864IPR003657WRKY domain
PfamPF031061.3E-22806863IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 983 aa     Download sequence    Send to blast
MEVFAGSQNL QCEPSVPVED QCVLQTVEDQ FVSQTVEDEC VSQTVESLPS VINENQAASS  60
HELAISVYDP NVVAVDSANL RSDKLVEVPV AVSESHHRDG LDNGIQDIKS SNKAIGLQKS  120
WEDGYNWRKY GQKHIKGNEF PRSYYKCSHP NCQVKKQVEQ SQDGGITDVI YRGKHDHPKP  180
QSINPMAMGG ILSVQGERLS GSSFKSTEDK SPRASSLTSH HANPNGVAEL SKPDESPQLS  240
VAVTSDNNVG DGTQLRRNRD EIQDDNDPES KRRCLNFSTE IASDSAANDR QHMESFQAHQ  300
IQSQTFASTS SDDNVTAAEM SHVMAPCTTV FKPPIDMATS KALVPVGGDL SASQQRHGAD  360
VGMQVIQTDH KVTCHSGTAD RFWGDGYNWR KYGQKHIKGS EFPRSYYRCT HPNCQVKKQL  420
ECSQDGQVTD IVYKGEHNHP KPQASSHIAV GRILSIQEEG FEQVSSLHQA YDKSSACQTT  480
DHTDHPVQTC ETAVQGEPAK SNRTGENADN SAEVDSKCGR LEVTKETSKD AVTAMNHQKY  540
KPSVEVQGHF QAETPLSSPS IKIKEAAGSP HEYTPTLTVS NSPVYMVTSK GIVPVEVDTD  600
DKRQRQNSVN ELAVEEPNHN GLSLSMTEKL LENAYHWRKY GQKNIKGSEF PRSYYRCTHP  660
NCQVKMQLER SHDGRIIEII YKGKHDHPKP QPITRMAIGA ILSLEEDRPD RISDGSGGNP  720
SNGPVQTCAC TNPSRIPKLT PVTRSVENFD TTAEKLKRGN EVEDDIDMES KRRKKDVGDV  780
DLTPVIRTPR EPRVVVETLS EVDVVDDGYR WQKYGRKIVK GNSNPRNYYR CSNGGCQVKK  840
HVERAANNPK AVITTYEGKH NHDLPLARIT THDTTGLVSS ADGLNDTLKT RSGELIANGI  900
DAGVVNGLSL ENRICEREEI IDVEPIESQS TITDLDRNKM IEPAPALAHN DELDLDADQG  960
LSFDTPSSTQ LVYPNNTENL ES*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-31122865677Probable WRKY transcription factor 4
2lex_A1e-31122865677Probable WRKY transcription factor 4
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5EQZ30.0A0A2G5EQZ3_AQUCA; Uncharacterized protein
STRINGAquca_005_00232.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.13e-69WRKY family protein