PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Aqcoe1G368600.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 118aa MW: 13939.7 Da PI: 8.47 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 13 | 0.0002 | 33 | 52 | 5 | 24 |
HHHHHHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLr 24 + e+ErrRR+++N+++ +Lr Aqcoe1G368600.1.p 33 NLEAERRRRHKLNERLINLR 52 6689************9998 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 3.01E-10 | 20 | 93 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 9.312 | 28 | 79 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.4E-8 | 28 | 98 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 118 aa Download sequence Send to blast |
MEEFYVQNEL AEQGRRGRQG KNINDDTQFK SKNLEAERRR RHKLNERLIN LRLFTHYHFL 60 CDYKFATIID DAITYITGLQ KHVKALGDQI REMETRETEK QGSVGGRVQE EQIEKLQ* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_010054452.1 | 2e-18 | PREDICTED: transcription factor DYT1 | ||||
TrEMBL | A0A2G5ERV7 | 7e-80 | A0A2G5ERV7_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_005_00413.1 | 1e-80 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G21330.1 | 9e-08 | bHLH family protein |
Link Out ? help Back to Top | |
---|---|
Phytozome | Aqcoe1G368600.1.p |