PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe1G183900.2.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

Trihelix

Protein Properties

Length: 612aa MW: 68442.9 Da PI: 10.0099

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe1G183900.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	30.8	7.9e-10	3	49	37	85
trihelix 37 kmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 k++e+g++rs+k C ek++n++k+y ++k+++ + e+ +++ +f+ l Aqcoe1G183900.2.p 3 KLAEKGYTRSAKNCMEKFKNIRKYYNRTKKSQAGS--EDGKSHCFFSWL 49 789******************************95..444456688766 PP
2	trihelix	64.6	2.2e-20	133	216	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW++qe++aL+++r+em+ + + W+evs+k+ ++g+ rs++ Ck k++nl++ yk keg+ ++++++s +f++le Aqcoe1G183900.2.p 133 RWQDQETMALLNIRSEMDAFFCYPTATCSPWKEVSRKLVQQGYIRSAQNCKVKFKNLRRNYKHSKEGRAGHQDRKS--SHFFSKLE 216 8*********************************************************************976666..67899886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	2.0E-7	2	49	No hit	No description
PROSITE profile	PS50090	6.586	131	190	IPR017877	Myb-like domain
Pfam	PF13837	2.9E-15	131	216	No hit	No description
CDD	cd12203	5.78E-14	132	197	No hit	No description
Pfam	PF05266	2.3E-42	433	610	IPR007930	Protein of unknown function DUF724

Sequence ? help Back to Top
Protein Sequence Length: 612 aa Download sequence Send to blast
MRKLAEKGYT RSAKNCMEKF KNIRKYYNRT KKSQAGSEDG KSHCFFSWLK AFHNSASATK 60 INYAATSKPN SAPTPVSIGI GMASSSERTQ APSSYNGTEA ASPVSSRRPP RLSAKFKEVG 120 GEEAYHSVPV RKRWQDQETM ALLNIRSEMD AFFCYPTATC SPWKEVSRKL VQQGYIRSAQ 180 NCKVKFKNLR RNYKHSKEGR AGHQDRKSSH FFSKLEGLSS TIGATTATMA TTSTPNLTPT 240 PVSIRIKMVG SSGSIRTPPN SVMPAIITTA AATQAGVSKF SFTNSNVKLP IGVPASAAAD 300 DVNLVPTDCR QNVLPSTQKH QSLSLSLRKF NPPINGDAAN KNLTDHTQLL SLTVEKRVEA 360 NGDNLLMPNR AITPTHRSMK SLKHLQSSNE VKSSLSLEAR EDERALQSNV TTNPYSSPIQ 420 QDQRQVHVEE DSLPFVKCAH SMWGIFESMK VFQLMPQYPH FRPLGEENEV LREGIAIGHM 480 LNFANLVENI CKLHIEDPKN RLENMLKALT DLEELGFAVQ SIRSQLEELL RIKDIYSQSN 540 YNLKSAEEEL VVRKCQLDEK QESINRLNMQ LQELLMEMVR KCCNIAELQR KVDSTKERLH 600 AVASDFARTL R*

Sequence ? help Back to Top

Protein Sequence Length: 612 aa Download sequence Send to blast

MRKLAEKGYT RSAKNCMEKF KNIRKYYNRT KKSQAGSEDG KSHCFFSWLK AFHNSASATK  60
INYAATSKPN SAPTPVSIGI GMASSSERTQ APSSYNGTEA ASPVSSRRPP RLSAKFKEVG  120
GEEAYHSVPV RKRWQDQETM ALLNIRSEMD AFFCYPTATC SPWKEVSRKL VQQGYIRSAQ  180
NCKVKFKNLR RNYKHSKEGR AGHQDRKSSH FFSKLEGLSS TIGATTATMA TTSTPNLTPT  240
PVSIRIKMVG SSGSIRTPPN SVMPAIITTA AATQAGVSKF SFTNSNVKLP IGVPASAAAD  300
DVNLVPTDCR QNVLPSTQKH QSLSLSLRKF NPPINGDAAN KNLTDHTQLL SLTVEKRVEA  360
NGDNLLMPNR AITPTHRSMK SLKHLQSSNE VKSSLSLEAR EDERALQSNV TTNPYSSPIQ  420
QDQRQVHVEE DSLPFVKCAH SMWGIFESMK VFQLMPQYPH FRPLGEENEV LREGIAIGHM  480
LNFANLVENI CKLHIEDPKN RLENMLKALT DLEELGFAVQ SIRSQLEELL RIKDIYSQSN  540
YNLKSAEEEL VVRKCQLDEK QESINRLNMQ LQELLMEMVR KCCNIAELQR KVDSTKERLH  600
AVASDFARTL R*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G5DDW4	0.0	A0A2G5DDW4_AQUCA; Uncharacterized protein
STRING	Aquca_022_00261.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33240.1	2e-20	GT-2-like 1

Link Out ? help Back to Top
Phytozome	Aqcoe1G183900.2.p