PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G110800.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family HSF
Protein Properties Length: 655aa    MW: 72217.2 Da    PI: 5.2888
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G110800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind106.71.8e-331572491102
                        HHHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXX CS
       HSF_DNA-bind   1 aFlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkke 92 
                        aFl k++++++d++l+ +isw ++g+sfvv+++ +fa+ +Lp+ Fkh+nf+SFvRQLn+YgF+kv+ ++         weF+++ F +gk++
  Aqcoe1G110800.1.p 157 AFLCKTFDLVDDPSLDPVISWGSSGQSFVVWKPVDFARIILPRNFKHNNFSSFVRQLNTYGFRKVDADR---------WEFANEDFLRGKRH 239
                        69****************************************************************999.........************** PP

                        XXXXXXXXXX CS
       HSF_DNA-bind  93 llekikrkks 102
                        ll++i+r+k 
  Aqcoe1G110800.1.p 240 LLKNIHRRKA 249
                        *******986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF467856.94E-33153247IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004151.4E-56154247IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene3DG3DSA:1.10.10.102.1E-35155247IPR011991Winged helix-turn-helix DNA-binding domain
PRINTSPR000562.9E-17158181IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004472.2E-29158247IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000562.9E-17196208IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS004340197221IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000562.9E-17209221IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009408Biological Processresponse to heat
GO:0010200Biological Processresponse to chitin
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 655 aa     Download sequence    Send to blast
MNPITTSPPL SSSYPSTYHH SSGSDITFDM KPLAAIPLSS SPFGKGALSS STTTSMFMES  60
KGSSFGESSC FFPPCSSSLM EFEAFLAKPT SSSAIIESKG SSSSSLARFS QIGGDSVVVS  120
AVGSGGDKGF PVLNEGETNV EVVPQPLECL QGNPIPAFLC KTFDLVDDPS LDPVISWGSS  180
GQSFVVWKPV DFARIILPRN FKHNNFSSFV RQLNTYGFRK VDADRWEFAN EDFLRGKRHL  240
LKNIHRRKAI QGQQIGSYTE SPGDTRRTGL EGEVEKLKHD RTILMQELVR LQQEHRGRAS  300
QVETMKQRME AAEQRQKQMI SFFAKVLQNP VFLTRLQKMN EQKKISSPRE KRKFVKHHQA  360
DHISSDSTLE GLLVKYKSGG DNIVVSSPME NLNPTPDSQL SDNILQDVVG KSGLGVNDQN  420
IMLTDGLQQE HVLVSDHMET GGSSLGSLGY GDSFVKGKNV ASPQLQVGTD CYVSFTEDLP  480
KEKTFPDNMS LGVEGIAKQV GAWDMDFDVA AGFDTCSQDI WSNISNYEEQ ELISGLSDLW  540
DMGSQHAAED FGVGNWLDDD SSPENFASQA GQPKDNRYKN AGFSDVENLD YPVGIGGLIC  600
HLYALWFNFK KAIAVRLACL YGLVWSLCMN YLQIYLVSGK AFTSQWYEFL FLIS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ldu_A3e-2315524717120Heat shock factor protein 1
5d5u_B3e-2315524726129Heat shock factor protein 1
5d5v_B3e-2315524726129Heat shock factor protein 1
5d5v_D3e-2315524726129Heat shock factor protein 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010278228.11e-164PREDICTED: heat stress transcription factor A-3
TrEMBLA0A2G5EG740.0A0A2G5EG74_AQUCA; Uncharacterized protein
STRINGAquca_009_00974.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03720.12e-94heat shock transcription factor A3