PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe1G110100.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

NAC

Protein Properties

Length: 511aa MW: 59915.4 Da PI: 4.9852

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe1G110100.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	155.9	1.7e-48	38	166	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 lppGfrFhPtdeelv++yLk+k+ + ++ +i+e+diyk++P++Lp + +k+++++wyfF +r++ky++g+r++r+t++gyWk tg+d+ Aqcoe1G110100.1.p 38 LPPGFRFHPTDEELVMYYLKRKICNYSCLNLAIIAEIDIYKWDPEELPeQsVLKNGDRKWYFFNRRERKYPKGSRASRQTAHGYWKITGRDR 129 79***********************777799**********95347788999****************************** PP NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +++ vg kktLvfy+grap++++tdWv++ey+l Aqcoe1G110100.1.p 130 NITY-NSQIVGSKKTLVFYRGRAPSARRTDWVIQEYTL 166 .999**************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	3.01E-54	33	190	IPR003441	NAC domain
PROSITE profile	PS51005	54.993	38	190	IPR003441	NAC domain
Pfam	PF02365	2.6E-24	39	166	IPR003441	NAC domain
Pfam	PF03469	3.0E-47	377	507	IPR005379	Uncharacterised domain XH

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence Send to blast
MAEMVMVSDR EQQHQQQQQQ QREGFDSEIE RKKFWASLPP GFRFHPTDEE LVMYYLKRKI 60 CNYSCLNLAI IAEIDIYKWD PEELPEQSVL KNGDRKWYFF NRRERKYPKG SRASRQTAHG 120 YWKITGRDRN ITYNSQIVGS KKTLVFYRGR APSARRTDWV IQEYTLDQRE LENSPDADKE 180 SYVLCKFYKK NGSGPMHPND FGAAYNDEDW DNDENLIEDN AINREKLVRQ LNGYAALDIS 240 SVHNQCHQPV NVEEIPMEIE EKPIVSQIYA DNSSGDQPPA GEFFIELSLL GRQVDEVEGR 300 CSSLEHTGDD ISEFEKKIEA LKKALDEKES ELEDMESLNS TLIVKENMSN CELQEARKEL 360 INGLQNFPSS PPEIGIKQIG ELNKEPFMKV CIQKFPPEER GEKAIELLQF WQHEVGDPEW 420 HPFKRITLFG KMQEAVDIND DKLVMLKKEW GWEVYEAVVT ALKELNEYNG SGRYVFPELW 480 NFQEKRRATL KEVIQFIMNY MERSKNKRRR *

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence Send to blast

MAEMVMVSDR EQQHQQQQQQ QREGFDSEIE RKKFWASLPP GFRFHPTDEE LVMYYLKRKI  60
CNYSCLNLAI IAEIDIYKWD PEELPEQSVL KNGDRKWYFF NRRERKYPKG SRASRQTAHG  120
YWKITGRDRN ITYNSQIVGS KKTLVFYRGR APSARRTDWV IQEYTLDQRE LENSPDADKE  180
SYVLCKFYKK NGSGPMHPND FGAAYNDEDW DNDENLIEDN AINREKLVRQ LNGYAALDIS  240
SVHNQCHQPV NVEEIPMEIE EKPIVSQIYA DNSSGDQPPA GEFFIELSLL GRQVDEVEGR  300
CSSLEHTGDD ISEFEKKIEA LKKALDEKES ELEDMESLNS TLIVKENMSN CELQEARKEL  360
INGLQNFPSS PPEIGIKQIG ELNKEPFMKV CIQKFPPEER GEKAIELLQF WQHEVGDPEW  420
HPFKRITLFG KMQEAVDIND DKLVMLKKEW GWEVYEAVVT ALKELNEYNG SGRYVFPELW  480
NFQEKRRATL KEVIQFIMNY MERSKNKRRR *

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	9e-45	37	194	16	169	NO APICAL MERISTEM PROTEIN
1ut4_B	9e-45	37	194	16	169	NO APICAL MERISTEM PROTEIN
1ut7_A	9e-45	37	194	16	169	NO APICAL MERISTEM PROTEIN
1ut7_B	9e-45	37	194	16	169	NO APICAL MERISTEM PROTEIN
3swm_A	1e-44	37	194	19	172	NAC domain-containing protein 19
3swm_B	1e-44	37	194	19	172	NAC domain-containing protein 19
3swm_C	1e-44	37	194	19	172	NAC domain-containing protein 19
3swm_D	1e-44	37	194	19	172	NAC domain-containing protein 19
3swp_A	1e-44	37	194	19	172	NAC domain-containing protein 19
3swp_B	1e-44	37	194	19	172	NAC domain-containing protein 19
3swp_C	1e-44	37	194	19	172	NAC domain-containing protein 19
3swp_D	1e-44	37	194	19	172	NAC domain-containing protein 19
4dul_A	9e-45	37	194	16	169	NAC domain-containing protein 19
4dul_B	9e-45	37	194	16	169	NAC domain-containing protein 19

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010241796.1	1e-142	PREDICTED: NAC domain-containing protein 26-like
TrEMBL	A0A2G5EG52	0.0	A0A2G5EG52_AQUCA; Uncharacterized protein
STRING	Aquca_009_00966.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	2e-67	NAC domain containing protein 17

Link Out ? help Back to Top
Phytozome	Aqcoe1G110100.1.p