PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G101400.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family GeBP
Protein Properties Length: 428aa    MW: 47836.8 Da    PI: 4.5935
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G101400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57382.37e-26190286197
             DUF573   1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifels 92 
                        klfqr++se+Dei +L Gl++fk+k +    + +++f++f+k+s+++ ++ +q+++K++rL kK++k+vk+ak g +p++s++h  k++ ls
  Aqcoe1G101400.1.p 190 KLFQRIFSEKDEIDVLNGLLEFKKKGNRITNSGLSEFFDFLKGSVHVGANLNQITNKVQRLHKKYRKNVKRAKPGGDPTISNPHGLKSYLLS 281
                        579*******************8887778888************************************************************ PP

             DUF573  93 kkiWg 97 
                        k iWg
  Aqcoe1G101400.1.p 282 KEIWG 286
                        ****8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.4E-24192286IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    Send to blast
MAPKRPSLLD QPPPSVSTSE DEVEGTEGEE EDEEEVEGVK QEEEESEEEE SGEEEEEEEI  60
DEKTPKPIQS SHKNPNPNNK ANEDGDIAED DDDDDEEEND ESGSDSGSDS DNEPVKHMIA  120
PRNVDVKPIS SKPMVDIPKS KKPTSTSSAA VKRPLETDSN DKDSKRDKKK KKIADIEEKD  180
TENKSGEEKK LFQRIFSEKD EIDVLNGLLE FKKKGNRITN SGLSEFFDFL KGSVHVGANL  240
NQITNKVQRL HKKYRKNVKR AKPGGDPTIS NPHGLKSYLL SKEIWGDQIF KDGEENQSGV  300
TAGKKSKSKP KSNGVASPTP KKKLLVLPAI SPKVEPMEED NVIGSHYQYL DQSLKSQNHL  360
SLPMPPADFG EITAKDGWDK LGSLKAQAFD QRWKALIIKE TEVYLERVEL VQEQTKWMLD  420
MHKSSDS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5EGD60.0A0A2G5EGD6_AQUCA; Uncharacterized protein
STRINGAquca_009_00897.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.15e-18DNA-binding storekeeper protein-related transcriptional regulator