PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe1G011200.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

G2-like

Protein Properties

Length: 290aa MW: 31547.4 Da PI: 9.4108

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe1G011200.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.8	2.5e-33	45	99	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt+eLH+rFv+a++qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl Aqcoe1G011200.1.p 45 KQRLRWTTELHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRL 99 79****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	12.703	42	102	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	4.8E-32	44	100	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.4E-25	45	100	IPR006447	Myb domain, plants
SuperFamily	SSF46689	1.25E-17	45	99	IPR009057	Homeodomain-like
Pfam	PF00249	1.7E-8	47	98	IPR001005	SANT/Myb domain
Pfam	PF14379	1.1E-24	131	177	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence Send to blast
MYQARKFSTV GLVPHKAQSA EQHTSIGSLG ESAKNDSGTS GGNGKQRLRW TTELHDRFVD 60 AITQLGGPDR ATPKGVLRVM GVPGLTIYHV KSHLQKYRLA KYLPESPADG SKDEKKDSGD 120 SLSSMDSAPG IQINEALRMQ MEVQKRLHEQ LEVQRQLQLR IEAQGKYLQK IIEEQQKLGG 180 VLKASETMQV SKELQQPSTP PSNPRVDPEP PLKKHRGEDK TLEPAPSAGP PRTDKKPDFV 240 SPWDQDYGIN VVGGFEFGVA SDFKIGKDGE PQRTSQVAGP AYGPGGSSS*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	8e-25	44	102	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	8e-25	44	102	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	8e-25	44	102	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	8e-25	44	102	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	8e-25	44	102	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	8e-25	44	102	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	8e-25	44	102	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	8e-25	44	102	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010251692.1	1e-134	PREDICTED: myb family transcription factor PHL7-like
Swissprot	Q9SJW0	4e-77	PHL7_ARATH; Myb family transcription factor PHL7
TrEMBL	A0A2G5EC04	0.0	A0A2G5EC04_AQUCA; Uncharacterized protein
STRING	Aquca_009_00105.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	1e-55	G2-like family protein

Link Out ? help Back to Top
Phytozome	Aqcoe1G011200.1.p