PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe0008s0016.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family GeBP
Protein Properties Length: 324aa    MW: 36872.6 Da    PI: 4.9643
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe0008s0016.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573651.7e-20143235297
              DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifels 92 
                         +f +lws++DeivlL++++d+ +     + +d + + + +k+s+sf+++ +ql +K+ ++ kK++k +  + + k  +f+++hd k++++ 
  Aqcoe0008s0016.1.p 143 RFAKLWSNQDEIVLLKAMVDYGKL---TSASDYEIILKSIKNSLSFDYTIKQLKNKVDNFTKKYRKLEYGQPKAKGLKFKEPHDAKVYQFL 230
                         7999*****************444...5577*************************************9999******************9 PP

              DUF573  93 kkiWg 97 
                         k  +g
  Aqcoe0008s0016.1.p 231 KTYYG 235
                         98775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.6E-17144233IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MTSPSSSSCS SYEDDTVITE PGKIVVQQNL ANQEVTQNLE DGKEDDDSSS SEGEEEEDSG  60
DDDEEEGERE KHTNQKNEVE EKEEEEQESD EEKNEVSKDE VFSTLAGSNS KKRSFNRRDD  120
IVDAKDQQPN KKPKTIGSDS KNRFAKLWSN QDEIVLLKAM VDYGKLTSAS DYEIILKSIK  180
NSLSFDYTIK QLKNKVDNFT KKYRKLEYGQ PKAKGLKFKE PHDAKVYQFL KTYYGGEEKE  240
QNEGDQPSEA IKVVHRRSSR NKKKLNANSR SSGLVSVIVD KGRAEDNLEQ KRKDLMIAEA  300
EVHLRRLQLI SEVGRLMLKA SRR*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5CJE00.0A0A2G5CJE0_AQUCA; Uncharacterized protein
STRINGAquca_050_00058.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.13e-11DNA-binding storekeeper protein-related transcriptional regulator