PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco019267.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family G2-like
Protein Properties Length: 385aa    MW: 42234.6 Da    PI: 5.9781
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco019267.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like36.98e-125983125
      G2-like  1 kprlrWtpeLHerFveaveqLGGse 25
                 k+rlrWt++LH+rFv+a++qLGG++
  Aco019267.1 59 KQRLRWTSDLHDRFVNAITQLGGPD 83
                 79*********************98 PP
2G2-like48.12.6e-151401702555
      G2-like  25 ekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                    AtPk +l++m+v+g+t++hvkSHLQkYRl
  Aco019267.1 140 RGATPKGVLRIMGVPGITIYHVKSHLQKYRL 170
                  569***************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
TIGRFAMsTIGR015571.7E-85984IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.607.5E-275984IPR009057Homeodomain-like
SuperFamilySSF466895.02E-6140170IPR009057Homeodomain-like
TIGRFAMsTIGR015576.4E-11141171IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.607.5E-27142171IPR009057Homeodomain-like
PfamPF143791.0E-22202248IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    Send to blast
MEDLAVLKSL RVFAMYHPKK FSTLHMAPHK SQGSEQTGNV SVMDGSSLNN STNSGGGGKQ  60
RLRWTSDLHD RFVNAITQLG GPDISILESW RLVEAANLAV TSSSKNDVTM PCNFWTDIGV  120
SLMHEISFVV WKVSNLVLLR GATPKGVLRI MGVPGITIYH VKSHLQKYRL AKFLPESPAD  180
GSKDETKDSG DTLSGNDSAP EIQINEALKM QMEVQKRLNE QLEVQKQLQL RIEAQGRYLQ  240
KIIEEQQKLD GAVKSSEGNE GNKNASASSS NLEDCLGHTP FPSKKPRISN PPAEPTLENT  300
NPELKPDFIR QLEHEIFESS VGDFVLGEAI EFKGEGGSSE QLGKGLVDVT SAQYLEVSNL  360
RVDCGSRNQE IVVEQQLHHS CGTI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020101686.11e-151myb family transcription factor PHL7-like isoform X1
TrEMBLA0A199UU541e-147A0A199UU54_ANACO; Protein PHR1-LIKE 1
STRINGXP_008788479.19e-98(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP79133343
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.18e-52G2-like family protein