PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco017021.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family G2-like
Protein Properties Length: 1299aa    MW: 143263 Da    PI: 6.3031
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco017021.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like103.31.5e-323589155
      G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                 kprlrWtp+LH+rFv+av++LGG+ekAtPk++l+lm++kgLtl+h+kSHLQkYRl
  Aco017021.1 35 KPRLRWTPDLHDRFVDAVTKLGGPEKATPKSVLRLMGMKGLTLYHLKSHLQKYRL 89
                 79****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.7873292IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.2E-313290IPR009057Homeodomain-like
TIGRFAMsTIGR015578.7E-243590IPR006447Myb domain, plants
SuperFamilySSF466894.3E-153590IPR009057Homeodomain-like
PfamPF002492.2E-83788IPR001005SANT/Myb domain
PfamPF143792.2E-22131175IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
PfamPF078423.9E-289891192IPR022783GC-rich sequence DNA-binding factor domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000398Biological ProcessmRNA splicing, via spliceosome
GO:0042023Biological ProcessDNA endoreduplication
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0030371Molecular Functiontranslation repressor activity
Sequence ? help Back to Top
Protein Sequence    Length: 1299 aa     Download sequence    Send to blast
MFEGMERSYP AAAAAATMYE AVEGSGGVVL SRDPKPRLRW TPDLHDRFVD AVTKLGGPEK  60
ATPKSVLRLM GMKGLTLYHL KSHLQKYRLG KQTKKETGGQ ANTGSNSSVN SYSCVTPSNV  120
SIGNNIGELP LAEALRYQIE VQRKLQEQLE VQKKLQMRIE AQGKYLQAIL EKAHRSLPLD  180
VNGTRDFEAA SAQLTDFNLA LSGLMDNVNQ VCEEKSPEPG KAMTQDSIER SNNNASTLLR  240
RNREEEVRDM KVNLNAVWGE GGGRCERSSE RTKEAKKWIA EWIRGEFATT FPPSRVSLSP  300
SPSGRVRETL AVSLADPQFA ESKLVRNPSL LISIEESGYV FSMSSGRAKN FRRRSEDSGV  360
NGDEKPGPTP TTTIASSSSS STANRSQTLG SAAKPKSSKP SGPKRLSFAD EEEDEDSEGG  420
GGVAVRRPPA RAPSSAAPVH KLTAAKDRSK SSVPLPPIPS NVQPQTGEYT KERLRELQKN  480
ARPLGSMPKP QPTTAPSFSE PKSQKPEPAS SEPVIVLKGL LKPTSVTATA GGTQRGVAKD  540
EDEEEEEEEE EEEERADGDE ERADGERQRK LPVIPDRATI DAIRAKRQQM QQPRRLGPDY  600
ISLDGGGMLS SRPSAGGSSD EEDSDFQGRI ALFGDKVGGK TKKGVFESIE EPVSISSKFQ  660
EVGINREEDE DDEEERKWEE EQFRKGLGRR LDETSSHRGA TGVSTVVPVQ PQPSIYSGIA  720
PSMGNVPIGA SVLVTRSAEV MSIAQQAEVA TRALQDNISK LKESHKITLN SLVRTDTHLS  780
EALSEMSDLE KSLEAADKKY VFMQQLREFI SVMCDFLNDK AFYIEELEEQ MQKLHEKRAL  840
AISDRRAFDF ADAESEVEAA VSAAMSVLSK GSGPTYVSAA TAAAQKAMAA ARECPNLPVE  900
LDEFGRDINL RKRMDFTRRA KERKIKRAKA ESKRMSSLGK GNKSEQIEGE LSTDESETEM  960
CAYGFSRSEL LDTAEQIFAD ASEEYSSLRI VKERFEGWKN KYSSTYRDAY VSLSVPAVFS  1020
PYVRLELLKW DPLYKTTDFF DMEWHKLLFD YGKPGGDHDF ELDDADVNLI PGLVEKIALP  1080
ILHHEIAHCW DILSTRLTKN AVFATNMVIS YIPGSSKALH ELLAVVRNRL NEAISSLSVP  1140
AWNTTVTKAV PGAAQFAAYR FGLSLRLLRN ICLWKNILAL PILEKLALEE LLGGKLLPHL  1200
KSIISDIHDA ITRTERIVAS LSGVWAGPEV KSEPSQKLRP LVDFVAELGS KLERRHASGA  1260
SEEETRGLAR RLKNMLVALN EYDKARAILK TFQLKEAL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A9e-203588255Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B9e-203588255Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A7e-203591157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B7e-203591157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C7e-203591157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D7e-203591157Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A9e-203588255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C9e-203588255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D9e-203588255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F9e-203588255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H9e-203588255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J9e-203588255Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020093660.10.0transcriptional repressor ILP1
TrEMBLA0A2H3YK570.0A0A2H3YK57_PHODC; transcriptional repressor ILP1-like
STRINGXP_008800013.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45580.17e-52G2-like family protein