PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco005452.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family GRAS
Protein Properties Length: 111aa    MW: 11876.4 Da    PI: 3.9077
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco005452.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS33.46e-11136339374
         GRAS 339 lllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  +ll  ++++gy v+e +g+l+lgW++rpL+s+SaWr
  Aco005452.1   1 MLLTLFSGEGYCVDEVDGCLTLGWHNRPLISASAWR 36 
                  6999*******************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF035142.0E-8136IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    Send to blast
MLLTLFSGEG YCVDEVDGCL TLGWHNRPLI SASAWRADSD DVASDDTTTL VANNNHHNNF  60
YIINNNNNNN NNNNNNNNNN NSSAQSNSNS SNNNNSSTVD VQDAAGAVLM *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.15e-10GRAS family protein