PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aco005321.1

Organism

Ananas comosus

Taxonomic ID

4615

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas

Family

VOZ

Protein Properties

Length: 594aa MW: 65404 Da PI: 5.2936

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aco005321.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	410.1	4.1e-126	325	533	1	209
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdl 98 pppsaflgpkcalwdc+rpaqgsew+qdyc s+hatlalneg pg++pv+rp+gidlkdg+lfa+l ak++gk+vgip+cegaatakspwna+elfdl Aco005321.1 325 PPPSAFLGPKCALWDCPRPAQGSEWCQDYCISLHATLALNEGHPGMAPVIRPGGIDLKDGPLFASLIAKTRGKNVGIPVCEGAATAKSPWNAPELFDL 422 89********************************************************************************************** PP VOZ 99 sllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksa 196 s+l+getirewlffdkprrafesgnrkqrslpdy grgwhesrkq+mkefgglkrsyymdpqp+ fewhlyeyein++da+alyrle+klvd+kksa Aco005321.1 423 SVLDGETIREWLFFDKPRRAFESGNRKQRSLPDYGGRGWHESRKQLMKEFGGLKRSYYMDPQPLPRFEWHLYEYEINDCDAFALYRLEFKLVDAKKSA 520 ********************************************************************************************** PP VOZ 197 kgkvskdsladlq 209 k+k +++sl++ + Aco005321.1 521 KAKPASSSLNKAK 533 ****9998754 PP

Sequence ? help Back to Top
Protein Sequence Length: 594 aa Download sequence Send to blast
MGQIDTFLTT GLKDPYSTGS KALDHTGRAF GGAPLRRETR QFLSLLPHPP PPLFRGFDRL 60 SFSSDHLLRL LAALDLSSSS AAAAAAVVSA ATLREESRGE IAAAVTEAAA EAMGRGSRSA 120 SHQVFKDKAK NRVDDLQGMF SDLQSARRES RGADAAVLEE QVHQMLREWK AELNEASPAA 180 SLLGNSQDLL PSETLRLLQL SEEEDDATSK LAAGVPKPEP EDAAQRDVGV VQANGGTDVF 240 HENYYVNQEL PDNAFLYADD YKSNLHTDSN PNIMNCFDGP SHLEYQQYNV HQELSHNPYL 300 DINTSEQNTS DAFPHMSDLL ATICPPPSAF LGPKCALWDC PRPAQGSEWC QDYCISLHAT 360 LALNEGHPGM APVIRPGGID LKDGPLFASL IAKTRGKNVG IPVCEGAATA KSPWNAPELF 420 DLSVLDGETI REWLFFDKPR RAFESGNRKQ RSLPDYGGRG WHESRKQLMK EFGGLKRSYY 480 MDPQPLPRFE WHLYEYEIND CDAFALYRLE FKLVDAKKSA KAKPASSSLN KAKTNQKDVG 540 ESTHPAPNPV NQENISTAYH GLDQISLNGE IVYGPSLPYG YSIERLREYY GNT*

Sequence ? help Back to Top

Protein Sequence Length: 594 aa Download sequence Send to blast

MGQIDTFLTT GLKDPYSTGS KALDHTGRAF GGAPLRRETR QFLSLLPHPP PPLFRGFDRL  60
SFSSDHLLRL LAALDLSSSS AAAAAAVVSA ATLREESRGE IAAAVTEAAA EAMGRGSRSA  120
SHQVFKDKAK NRVDDLQGMF SDLQSARRES RGADAAVLEE QVHQMLREWK AELNEASPAA  180
SLLGNSQDLL PSETLRLLQL SEEEDDATSK LAAGVPKPEP EDAAQRDVGV VQANGGTDVF  240
HENYYVNQEL PDNAFLYADD YKSNLHTDSN PNIMNCFDGP SHLEYQQYNV HQELSHNPYL  300
DINTSEQNTS DAFPHMSDLL ATICPPPSAF LGPKCALWDC PRPAQGSEWC QDYCISLHAT  360
LALNEGHPGM APVIRPGGID LKDGPLFASL IAKTRGKNVG IPVCEGAATA KSPWNAPELF  420
DLSVLDGETI REWLFFDKPR RAFESGNRKQ RSLPDYGGRG WHESRKQLMK EFGGLKRSYY  480
MDPQPLPRFE WHLYEYEIND CDAFALYRLE FKLVDAKKSA KAKPASSSLN KAKTNQKDVG  540
ESTHPAPNPV NQENISTAYH GLDQISLNGE IVYGPSLPYG YSIERLREYY GNT*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KM663154	1e-135	KM663154.1 Ananas bracteatus clone 47437a microsatellite sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020098851.1	0.0	transcription factor VOZ1-like
Swissprot	Q9SGQ0	1e-177	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A199UCZ2	0.0	A0A199UCZ2_ANACO; Transcription factor VOZ1
STRING	XP_008798279.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2343	38	88

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-174	vascular plant one zinc finger protein

Link Out ? help Back to Top
Phytozome	Aco005321.1

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]