PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco005019.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family NAC
Protein Properties Length: 306aa    MW: 35280.6 Da    PI: 7.5698
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco005019.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM159.11.8e-49231512128
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..k 96 
                   pGfrFhPtdeelv +yL++kv++k l++ e+i+++diyk+ PwdLp +++ ++ekewyfF+ r +ky+++ r+nr+t sg+Wkatg d++++s+   
  Aco005019.1  23 LPGFRFHPTDEELVGFYLRRKVDKKLLSI-EIIRQIDIYKYSPWDLPkASTVGGEKEWYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDRPIYSStnI 119
                  69***************************.89***************445556889**************************************8655 PP

          NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                  ge +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  Aco005019.1 120 GECIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 151
                  667***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100553.98522178IPR003441NAC domain
SuperFamilySSF1019412.09E-5322178IPR003441NAC domain
PfamPF023657.4E-2524151IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005992Biological Processtrehalose biosynthetic process
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006561Biological Processproline biosynthetic process
GO:0009718Biological Processanthocyanin-containing compound biosynthetic process
GO:0010120Biological Processcamalexin biosynthetic process
GO:0042538Biological Processhyperosmotic salinity response
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MEKSIDQKEQ EIVLVEDEED LVLPGFRFHP TDEELVGFYL RRKVDKKLLS IEIIRQIDIY  60
KYSPWDLPKA STVGGEKEWY FFCLRGRKYR NSIRPNRVTG SGFWKATGID RPIYSSTNIG  120
ECIGLKKSLV YYRGSAGKGT KTDWMMHEFR LPSSGKDNDT HPSIQEAEIW TICRIFKRNI  180
SFNKKYQQEW NGSNSKKRKL IECASTTSSF ESVSVGDQYK LFGAHNNPHG EAPKLVYNNY  240
TERDNESFQV QYSSVTSPVV TENHSLATVH NPNFANPASN EFMKDGNWDE LGRIMEFWTD  300
TNTAY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-472418419171NO APICAL MERISTEM PROTEIN
1ut4_B1e-472418419171NO APICAL MERISTEM PROTEIN
1ut7_A1e-472418419171NO APICAL MERISTEM PROTEIN
1ut7_B1e-472418419171NO APICAL MERISTEM PROTEIN
3swm_A1e-472418422174NAC domain-containing protein 19
3swm_B1e-472418422174NAC domain-containing protein 19
3swm_C1e-472418422174NAC domain-containing protein 19
3swm_D1e-472418422174NAC domain-containing protein 19
3swp_A1e-472418422174NAC domain-containing protein 19
3swp_B1e-472418422174NAC domain-containing protein 19
3swp_C1e-472418422174NAC domain-containing protein 19
3swp_D1e-472418422174NAC domain-containing protein 19
4dul_A1e-472418419171NAC domain-containing protein 19
4dul_B1e-472418419171NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the 5'- RRYGCCGT-3' consensus core sequence. Central longevity regulator. Negative regulator of leaf senescence. Modulates cellular H(2)O(2) levels and enhances tolerance to various abiotic stresses through the regulation of DREB2A. {ECO:0000269|PubMed:22345491}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00310DAPTransfer from AT2G43000Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by H(2)O(2), paraquat, ozone, 3-aminotriazole and salt stress. {ECO:0000269|PubMed:22345491}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020092772.10.0transcription factor JUNGBRUNNEN 1-like
SwissprotQ9SK558e-85NAC42_ARATH; Transcription factor JUNGBRUNNEN 1
TrEMBLA0A199VUR50.0A0A199VUR5_ANACO; Transcription factor JUNGBRUNNEN 1
STRINGXP_008806688.11e-127(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP119138129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.14e-85NAC domain containing protein 42
Publications ? help Back to Top
  1. Shahnejat-Bushehri S,Nobmann B,Devi Allu A,Balazadeh S
    JUB1 suppresses Pseudomonas syringae-induced defense responses through accumulation of DELLA proteins.
    Plant Signal Behav, 2016. 11(6): p. e1181245
    [PMID:27159137]
  2. Shahnejat-Bushehri S,Tarkowska D,Sakuraba Y,Balazadeh S
    Arabidopsis NAC transcription factor JUB1 regulates GA/BR metabolism and signalling.
    Nat Plants, 2016. 2: p. 16013
    [PMID:27249348]
  3. Shahnejat-Bushehri S, et al.
    Arabidopsis NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato.
    Front Plant Sci, 2017. 8: p. 214
    [PMID:28326087]
  4. Sakuraba Y,Bülbül S,Piao W,Choi G,Paek NC
    Arabidopsis EARLY FLOWERING3 increases salt tolerance by suppressing salt stress response pathways.
    Plant J., 2017. 92(6): p. 1106-1120
    [PMID:29032592]
  5. Ebrahimian-Motlagh S, et al.
    JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13.
    Front Plant Sci, 2017. 8: p. 2118
    [PMID:29326734]