PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Achn345531

Organism

Actinidia chinensis

Taxonomic ID

3625

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia

Family

VOZ

Protein Properties

Length: 494aa MW: 54827.4 Da PI: 5.9644

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Achn345531	genome	IKGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	436.3	4e-134	206	422	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdls 99 pppsaflgpkcalwdc+rp+q +w+qdycssfha+lalneg+pg+tpvlrp+gi+lkdgllfaalsak+ gk+vgipecegaatakspwna+elfdl+ Achn345531 206 PPPSAFLGPKCALWDCPRPSQPLDWCQDYCSSFHAALALNEGPPGMTPVLRPGGIGLKDGLLFAALSAKALGKDVGIPECEGAATAKSPWNAPELFDLT 304 89*********************************************************************************************** PP VOZ 100 llegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakg 198 +legetirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+e+gglkrsyymdpqp + fewhlyeyein++da+alyrle+klvd+kksak+ Achn345531 305 VLEGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEYGGLKRSYYMDPQPRKDFEWHLYEYEINKCDACALYRLEFKLVDGKKSAKT 403 *********************************************************************************************** PP VOZ 199 kvskdsladlqkklgrlta 217 k+++ds+adlqk+lgrlta Achn345531 404 KLTNDSVADLQKQLGRLTA 422 ***************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence Send to blast
MRKGSKSGGC KTASHQHFKD RAKNRVDDLQ GMFTDLQSAR KESRSIDVAV LEEQVHQMLR 60 EWKNELNEPS PASSLQAGSL GSFSSDIYRL LHLCDEEDDA TSGLAAPKPE PDAPKVGGSA 120 GFQEGFSVNQ GPQQRDFQFV DQCKGPASVV HNLGVNNPGF PSHLDYHAYD LHQDVEQTFF 180 PGLDGTGLYV EDAMRQISGI LPNICPPPSA FLGPKCALWD CPRPSQPLDW CQDYCSSFHA 240 ALALNEGPPG MTPVLRPGGI GLKDGLLFAA LSAKALGKDV GIPECEGAAT AKSPWNAPEL 300 FDLTVLEGET IREWLFFDKP RRAFESGNRK QRSLPDYNGR GWHESRKQVM NEYGGLKRSY 360 YMDPQPRKDF EWHLYEYEIN KCDACALYRL EFKLVDGKKS AKTKLTNDSV ADLQKQLGRL 420 TAEFPSENKR SVKGRTKATS KDGVVGNIYS APNRMTPTSE GFDYGTSGPY DYLVDNLNGY 480 YFDVVEETRM HKE*

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence Send to blast

MRKGSKSGGC KTASHQHFKD RAKNRVDDLQ GMFTDLQSAR KESRSIDVAV LEEQVHQMLR  60
EWKNELNEPS PASSLQAGSL GSFSSDIYRL LHLCDEEDDA TSGLAAPKPE PDAPKVGGSA  120
GFQEGFSVNQ GPQQRDFQFV DQCKGPASVV HNLGVNNPGF PSHLDYHAYD LHQDVEQTFF  180
PGLDGTGLYV EDAMRQISGI LPNICPPPSA FLGPKCALWD CPRPSQPLDW CQDYCSSFHA  240
ALALNEGPPG MTPVLRPGGI GLKDGLLFAA LSAKALGKDV GIPECEGAAT AKSPWNAPEL  300
FDLTVLEGET IREWLFFDKP RRAFESGNRK QRSLPDYNGR GWHESRKQVM NEYGGLKRSY  360
YMDPQPRKDF EWHLYEYEIN KCDACALYRL EFKLVDGKKS AKTKLTNDSV ADLQKQLGRL  420
TAEFPSENKR SVKGRTKATS KDGVVGNIYS APNRMTPTSE GFDYGTSGPY DYLVDNLNGY  480
YFDVVEETRM HKE*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028055355.1	0.0	transcription factor VOZ1-like
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A2R6PXY5	0.0	A0A2R6PXY5_ACTCH; Transcription factor like
STRING	VIT_10s0003g00500.t01	0.0	(Vitis vinifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2818	24	54

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]