PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn253521 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | bHLH | ||||||||
Protein Properties | Length: 261aa MW: 29095.7 Da PI: 7.0617 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 23.1 | 1.3e-07 | 139 | 186 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR +iN+++ L+ ++P + k + a +L + ++Y++sLq Achn253521 139 SHSLAERVRRGKINERLKCLQGIVPGC----YKTMGMAVMLDEIINYVQSLQ 186 8*************************9....35599999**********998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 1.04E-8 | 133 | 190 | No hit | No description |
SuperFamily | SSF47459 | 6.54E-16 | 133 | 203 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.1E-15 | 135 | 197 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 14.761 | 135 | 185 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 5.9E-5 | 139 | 186 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.5E-7 | 141 | 191 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006351 | Biological Process | transcription, DNA-templated | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence Send to blast |
MELINQYAEL SQSPMENPNL INFQSLMGFS IDNFLIQQTP EFPGNLAGNF PGIFHHDAKN 60 VLPVSEPNSS GGNEIHGIKK RKEIDVQESS SGNSSPPVSE DGIRRKNGRG KRMRGNEERE 120 EKLKEVVHVR ARRGQATDSH SLAERVRRGK INERLKCLQG IVPGCYKTMG MAVMLDEIIN 180 YVQSLQNQVE FLSMKLTAAS RFYDFNSDTD AMEAMQRAKA YEAQKVQRIV TEGYQELASS 240 SQLGSSDLTF GSFPSLPYNT * |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Positive regulator of brassinosteroid signaling. {ECO:0000269|PubMed:12454087}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by brassinosteroid, auxin and ethylene, and repressed by abscisic acid. Insensitive to gibberellic acid. {ECO:0000269|PubMed:12454087}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017240586.1 | 1e-110 | PREDICTED: transcription factor BEE 3-like | ||||
Swissprot | Q8GWK7 | 3e-62 | BEE3_ARATH; Transcription factor BEE 3 | ||||
TrEMBL | A0A2R6PCD7 | 0.0 | A0A2R6PCD7_ACTCH; Transcription factor BEE like | ||||
STRING | XP_007154151.1 | 1e-104 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3971 | 23 | 44 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18400.1 | 6e-61 | BR enhanced expression 1 |
Publications ? help Back to Top | |||
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