PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn243111
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 274aa    MW: 30012.7 Da    PI: 9.7168
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn243111genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.82.7e-1888138155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 ++ykGVr ++ +g+Wv+eIr p   ++++r++lg++ t+e Aa+a++aa ++l+g
  Achn243111  88 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCLKG 138
                 59*****998.**********9...336************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.47E-1988146No hitNo description
PROSITE profilePS5103221.41789146IPR001471AP2/ERF domain
PfamPF008472.7E-1189138IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.2E-2989148IPR001471AP2/ERF domain
SuperFamilySSF541712.29E-1989148IPR016177DNA-binding domain
SMARTSM003803.6E-3189152IPR001471AP2/ERF domain
PRINTSPR003672.0E-890101IPR001471AP2/ERF domain
PRINTSPR003672.0E-8112128IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MGKCSLSQKR RVVCGGLFQK ALTSSHIPNP HVPIGHNRKP QRSNIAQSFN THQNIVTMVK  60
KEHKIQTQPN KAMPSSTQSP SSSAMIKKKY KGVRMRSWGS WVSEIRAPNQ KTRIWLGSYS  120
TPEAAARAYD AALLCLKGKS VNLNFPTSSS FFHHHHHDTV LSPKSIQRVA AAAANTTTTT  180
TTPPPPPPLP STSSSSSTTT TSSSCSVSSP SMSSSPSNHI EDDFSLASSL DDYTSWYNFD  240
SPKYIDMING AFFDPLVVED AYEDDDIRLW SFC*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator involved in the regulation of plant development and tolerance to abiotic stresses (PubMed:21069430). Involved in salt and osmotic stress response pathways. May be regulated by the stress-related genes RD29A, RD22, DREB1A or P5CS during stress response (PubMed:27137403). Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:21069430, ECO:0000269|PubMed:27137403}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by jasmonate (JA) and ethylene. Down-regulated by freezing and heat stresses. {ECO:0000269|PubMed:21069430}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022869737.14e-63ethylene-responsive transcription factor ERF014-like
SwissprotQ9SFE48e-48ERF12_ARATH; Ethylene-responsive transcription factor ERF012
TrEMBLA0A2R6RP421e-101A0A2R6RP42_ACTCH; Ethylene-responsive transcription factor
STRINGPOPTR_0002s08610.12e-57(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA61772435
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.12e-34ERF family protein
Publications ? help Back to Top
  1. Kazama D,Kurusu T,Mitsuda N,Ohme-Takagi M,Tada Y
    Involvement of elevated proline accumulation in enhanced osmotic stress tolerance in Arabidopsis conferred by chimeric repressor gene silencing technology.
    Plant Signal Behav, 2014. 9(3): p. e28211
    [PMID:24614501]
  2. Kazama D, et al.
    Identification of Chimeric Repressors that Confer Salt and Osmotic Stress Tolerance in Arabidopsis.
    Plants (Basel), 2013. 2(4): p. 769-85
    [PMID:27137403]