PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Achn233651

Organism

Actinidia chinensis

Taxonomic ID

3625

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia

Family

bZIP

Protein Properties

Length: 449aa MW: 49070.2 Da PI: 9.1593

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Achn233651	genome	IKGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	41.9	2.2e-13	349	401	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r rr++kNRe+A rsR+RK+a++ eLe +++eL++ N++L+ + ee+ ++ + Achn233651 349 RRHRRMIKNRESAARSRARKQAYTLELEAEIAELKKINEELQRKQEEIMEMRK 401 799************************************99999999998875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	6.4E-8	345	406	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.611	347	398	IPR004827	Basic-leucine zipper domain
CDD	cd14707	1.14E-26	349	403	No hit	No description
Pfam	PF00170	3.6E-11	349	401	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.62E-9	349	398	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.2E-12	349	398	No hit	No description
PROSITE pattern	PS00036	0	352	367	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence Send to blast
MGSYLNFKNF GETPQPEGNG MKPVGNFPLA RQSSVYSLTF DEFQNSWGGL GKDFGSMNMD 60 ELLKNIWTAE ETQAMASSSG AHEGGALGGN LQRQGSLTLP RTVSQKTVDE VWRDLFKEIS 120 GVKDGGGSSE PHLQQRQPTL GEMTLEEFLA RAGVVRELDT QPMTRPSNNG FYGELPQPNN 180 ITPGLTLGFQ QLACNNVVVG NRIPENNNSV PNQSSGLPVN VNGVRSSQQQ LLHPSFPKQN 240 TLSFASSMPL ANNTHLANPG TRGPMVRIED PSINVALDQG TVIQNGVVGM TGLGAGTTVV 300 AAGSPVSRSS DGIAKNNVDT SSLSPSPCAF NGDVRGRKSG GTWEKAMERR HRRMIKNRES 360 AARSRARKQA YTLELEAEIA ELKKINEELQ RKQEEIMEMR KNQVHAPFTV GCLRLHPLRS 420 LLDSLRNQEF YHQAKIVRRK TFPILCNE*

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence Send to blast

MGSYLNFKNF GETPQPEGNG MKPVGNFPLA RQSSVYSLTF DEFQNSWGGL GKDFGSMNMD  60
ELLKNIWTAE ETQAMASSSG AHEGGALGGN LQRQGSLTLP RTVSQKTVDE VWRDLFKEIS  120
GVKDGGGSSE PHLQQRQPTL GEMTLEEFLA RAGVVRELDT QPMTRPSNNG FYGELPQPNN  180
ITPGLTLGFQ QLACNNVVVG NRIPENNNSV PNQSSGLPVN VNGVRSSQQQ LLHPSFPKQN  240
TLSFASSMPL ANNTHLANPG TRGPMVRIED PSINVALDQG TVIQNGVVGM TGLGAGTTVV  300
AAGSPVSRSS DGIAKNNVDT SSLSPSPCAF NGDVRGRKSG GTWEKAMERR HRRMIKNRES  360
AARSRARKQA YTLELEAEIA ELKKINEELQ RKQEEIMEMR KNQVHAPFTV GCLRLHPLRS  420
LLDSLRNQEF YHQAKIVRRK TFPILCNE*

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028099736.1	0.0	bZIP transcription factor 23-like
Refseq	XP_028099737.1	0.0	bZIP transcription factor 23-like
Refseq	XP_028099738.1	0.0	bZIP transcription factor 23-like
Refseq	XP_028099740.1	0.0	bZIP transcription factor 23-like
Swissprot	Q9M7Q4	1e-102	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A2R6RH44	0.0	A0A2R6RH44_ACTCH; ABSCISIC ACID-INSENSITIVE 5-like protein
STRING	XP_008236589.1	1e-156	(Prunus mume)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA776	24	97

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	2e-94	abscisic acid responsive elements-binding factor 2

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]