PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn233011
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family SRS
Protein Properties Length: 621aa    MW: 71045.3 Da    PI: 7.7724
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn233011genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF70292.77.7e-29965359
      DUF702  3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaa 59
                s +++CqdCGnqakkdC+++RCRtCCk+rgf+C+thvkstWvp +kr+   ++ +++
  Achn233011  9 SSSIRCQDCGNQAKKDCVYMRCRTCCKNRGFECQTHVKSTWVPLSKRQYSTTRPQQQ 65
                56789*****************************************98643333222 PP
2DUF70276.29.5e-246613882154
      DUF702  82 kqsalsstklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                 +q +  + k  ++++++ +e+ ++P+e++ ea f+cvrvss d++ +++aYqtav igGh+fkG+LydqG+ee
  Achn233011  66 QQLQPPNPKRFRGNPSSGVEVGNFPDELQMEATFQCVRVSSHDNEVDQYAYQTAVRIGGHIFKGTLYDQGPEE 138
                 4444455555678888999999*************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF051421.9E-4811137IPR007818Protein of unknown function DUF702
TIGRFAMsTIGR016232.6E-261455IPR006510Zinc finger, lateral root primordium type 1
TIGRFAMsTIGR016244.9E-2289136IPR006511Lateral Root Primordium type 1, C-terminal
SuperFamilySSF493631.07E-39192304IPR008963Purple acid phosphatase-like, N-terminal
Gene3DG3DSA:2.60.40.3803.6E-33210305IPR015914Purple acid phosphatase, N-terminal
PfamPF166561.1E-20211302IPR015914Purple acid phosphatase, N-terminal
CDDcd008396.85E-110308606No hitNo description
Gene3DG3DSA:3.60.21.105.2E-92308610IPR029052Metallo-dependent phosphatase-like
SuperFamilySSF563007.75E-57308615IPR029052Metallo-dependent phosphatase-like
PfamPF001496.2E-24313511IPR004843Calcineurin-like phosphoesterase domain, apaH type
PfamPF140081.6E-17537594IPR025733Iron/zinc purple acid phosphatase-like C-terminal domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003993Molecular Functionacid phosphatase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 621 aa     Download sequence    Send to blast
MMRLGGSSSS SIRCQDCGNQ AKKDCVYMRC RTCCKNRGFE CQTHVKSTWV PLSKRQYSTT  60
RPQQQQQLQP PNPKRFRGNP SSGVEVGNFP DELQMEATFQ CVRVSSHDNE VDQYAYQTAV  120
RIGGHIFKGT LYDQGPEETT HQPNLTTPID LPTNITTCTA SSSTNPSAPN PFMTVKCNGR  180
ITSSFTRKVE KSVDMPLDSD AFRVPPGYNA PQQVHITQGD HVGKAVIVSW VTKDEPGSNQ  240
VLYWTENSKH KSKAEGKVVT YKFYNYTSGY IHHCTIRNLK FNTKYTYEVG IGHTTRTFWF  300
MTPPEVGPDV PYTFGLIGDL GQTFDSNRTL THYEMNPANG RTVLFVGDLS YADDYPFHDN  360
VRWDTWGRFT ERSAAYQPWI WTAGNHEIDF APEIGETVPF KPYTHRYHVP YRASNSTAPF  420
WYSIKRASAY IIVLSSYSAY GKYTPQYQWL AEELAKVNRS ETPWLIVLMH SPWYNSNNYH  480
YMEGETMRVM FEPWFVHYKV DVVFAGHVHA YERSERVSNI GYNIVNGLCD PVNDQSAPVY  540
ITIGDGGNIE GLANKMTEPQ PKYSAFREAS FGHGIFDIKN RSHAYFGWHR NEDRYAVEAD  600
SQWFFNRYWN PIDDSTKAHK *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1kbp_A0.01856161432PURPLE ACID PHOSPHATASE
1kbp_B0.01856161432PURPLE ACID PHOSPHATASE
1kbp_C0.01856161432PURPLE ACID PHOSPHATASE
1kbp_D0.01856161432PURPLE ACID PHOSPHATASE
3kbp_A0.01856161432PURPLE ACID PHOSPHATASE
3kbp_B0.01856161432PURPLE ACID PHOSPHATASE
3kbp_C0.01856161432PURPLE ACID PHOSPHATASE
3kbp_D0.01856161432PURPLE ACID PHOSPHATASE
4kbp_A0.01856161432PURPLE ACID PHOSPHATASE
4kbp_B0.01856161432PURPLE ACID PHOSPHATASE
4kbp_C0.01856161432PURPLE ACID PHOSPHATASE
4kbp_D0.01856161432PURPLE ACID PHOSPHATASE
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010271524.10.0PREDICTED: purple acid phosphatase
SwissprotQ091310.0PPAF_SOYBN; Purple acid phosphatase
TrEMBLA0A2R6RHG90.0A0A2R6RHG9_ACTCH; Purple acid phosphatase
STRINGXP_010271524.10.0(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66350.15e-46Lateral root primordium (LRP) protein-related
Publications ? help Back to Top
  1. Schenk G, et al.
    Binuclear metal centers in plant purple acid phosphatases: Fe-Mn in sweet potato and Fe-Zn in soybean.
    Arch. Biochem. Biophys., 1999. 370(2): p. 183-9
    [PMID:10510276]
  2. Lebansky BR,McKnight TD,Griffing LR
    Purification and characterization of a secreted purple phosphatase from soybean suspension cultures.
    Plant Physiol., 1992. 99(2): p. 391-5
    [PMID:16668896]