PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Achn227711

Organism

Actinidia chinensis

Taxonomic ID

3625

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia

Family

bZIP

Protein Properties

Length: 412aa MW: 45028.4 Da PI: 10.0964

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Achn227711	genome	IKGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.5	9.1e-16	333	381	5	53
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 +r rr++kNRe+A rsR+RK+a++ eLee+v++L++eN+ L+k+ e+ Achn227711 333 RRHRRMIKNRESAARSRARKQAYTTELEEEVAKLKEENQVLRKRQVEIV 381 699***************************************9866555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.0E-11	329	394	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.105	331	376	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.5E-13	333	383	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.19E-10	333	377	No hit	No description
CDD	cd14707	5.44E-25	333	387	No hit	No description
Gene3D	G3DSA:1.20.5.170	6.7E-14	333	379	No hit	No description
PROSITE pattern	PS00036	0	336	351	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence Send to blast
MYFKNYGSEP PAVNGGVRPP EDFPLTRQQS IYSLTFHEFQ STVGGIGKEF GSMNMDELLR 60 NIWSAEETQT MGSTYCGQES GAPGGYLQRQ GSLTLPRTLS QKTVDEVWRD IATGGGGGGD 120 SNLPQRQQTL KEITLEEFLV RAGVVREDIQ LPGKLSNSGG FGDLSRPRND SALGFGFQQM 180 GQRTGLSNSN QIQTPIQSAN LPANVNGVRS TQQQMYIPQP QQQQQQQQQH SILTKQSNLA 240 YANPMPISNG THLGSPGIRS GIVGNTDSSM NGNLVQGGGM GTIGLGAGGP VMPLDGRGKS 300 NGDMSSVSPV PYAFNGGLRG RKNGNAVEKV VERRHRRMIK NRESAARSRA RKQAYTTELE 360 EEVAKLKEEN QVLRKRQVEI VEMQKNQVLE MMNTQQGAQR RCLRRTQTSP W*

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence Send to blast

MYFKNYGSEP PAVNGGVRPP EDFPLTRQQS IYSLTFHEFQ STVGGIGKEF GSMNMDELLR  60
NIWSAEETQT MGSTYCGQES GAPGGYLQRQ GSLTLPRTLS QKTVDEVWRD IATGGGGGGD  120
SNLPQRQQTL KEITLEEFLV RAGVVREDIQ LPGKLSNSGG FGDLSRPRND SALGFGFQQM  180
GQRTGLSNSN QIQTPIQSAN LPANVNGVRS TQQQMYIPQP QQQQQQQQQH SILTKQSNLA  240
YANPMPISNG THLGSPGIRS GIVGNTDSSM NGNLVQGGGM GTIGLGAGGP VMPLDGRGKS  300
NGDMSSVSPV PYAFNGGLRG RKNGNAVEKV VERRHRRMIK NRESAARSRA RKQAYTTELE  360
EEVAKLKEEN QVLRKRQVEI VEMQKNQVLE MMNTQQGAQR RCLRRTQTSP W*

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028054015.1	1e-169	bZIP transcription factor 23-like
Swissprot	Q9M7Q4	1e-115	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A2R6Q037	0.0	A0A2R6Q037_ACTCH; ABSCISIC ACID-INSENSITIVE 5-like protein
STRING	XP_009592272.1	1e-158	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA776	24	97

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	1e-100	abscisic acid responsive elements-binding factor 2

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]