PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Achn219231

Organism

Actinidia chinensis

Taxonomic ID

3625

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia

Family

VOZ

Protein Properties

Length: 480aa MW: 53008.1 Da PI: 5.0726

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Achn219231	genome	IKGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	433.2	3.7e-133	203	419	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdls 99 pppsaflgpkcalwdc+rpaqg +w+qdycs fha+lalneg+pg+tpvlrp+gi+lkdgllfa lsakvqgk+vgipecegaatakspwna+elfdl+ Achn219231 203 PPPSAFLGPKCALWDCPRPAQGLDWCQDYCSGFHAALALNEGPPGMTPVLRPGGIGLKDGLLFACLSAKVQGKDVGIPECEGAATAKSPWNAPELFDLT 301 89*********************************************************************************************** PP VOZ 100 llegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakg 198 +legetirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+e+gglkrsyymdpqp fewhlyeyei+++da alyrle+klvd+kks+kg Achn219231 302 VLEGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEYGGLKRSYYMDPQPRRDFEWHLYEYEISKCDASALYRLEFKLVDGKKSTKG 400 *********************************************************************************************** PP VOZ 199 kvskdsladlqkklgrlta 217 k ++ds+adlqk+l +lta Achn219231 401 KTTNDSVADLQKQLRKLTA 419 ***************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence Send to blast
MGKNSKSGGC KSASHQFFKD RAKNRVDDLQ GMFTDLQSAR KESRSIDVGV LEEQVHQMLR 60 EWKSELNEPS PASSMQGGSL GSFSEIYRLL QVREEEDDAT SGLAAPKPEP EAPKVGDSAS 120 FQEGFSVTQG AQGQDFQLID QSKGSSSVVQ NIGINNLGFP SQLDYHAYDL IQDLGQNVSC 180 FDGTGLYGDD AMNQIGYLPN ICPPPSAFLG PKCALWDCPR PAQGLDWCQD YCSGFHAALA 240 LNEGPPGMTP VLRPGGIGLK DGLLFACLSA KVQGKDVGIP ECEGAATAKS PWNAPELFDL 300 TVLEGETIRE WLFFDKPRRA FESGNRKQRS LPDYNGRGWH ESRKQVMNEY GGLKRSYYMD 360 PQPRRDFEWH LYEYEISKCD ASALYRLEFK LVDGKKSTKG KTTNDSVADL QKQLRKLTAE 420 FPSDNKRSVK GRAKATSKDG VGNIYSAPNR MEPTTEGFNY ETGASYDYLV DDLNGYYLT*

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence Send to blast

MGKNSKSGGC KSASHQFFKD RAKNRVDDLQ GMFTDLQSAR KESRSIDVGV LEEQVHQMLR  60
EWKSELNEPS PASSMQGGSL GSFSEIYRLL QVREEEDDAT SGLAAPKPEP EAPKVGDSAS  120
FQEGFSVTQG AQGQDFQLID QSKGSSSVVQ NIGINNLGFP SQLDYHAYDL IQDLGQNVSC  180
FDGTGLYGDD AMNQIGYLPN ICPPPSAFLG PKCALWDCPR PAQGLDWCQD YCSGFHAALA  240
LNEGPPGMTP VLRPGGIGLK DGLLFACLSA KVQGKDVGIP ECEGAATAKS PWNAPELFDL  300
TVLEGETIRE WLFFDKPRRA FESGNRKQRS LPDYNGRGWH ESRKQVMNEY GGLKRSYYMD  360
PQPRRDFEWH LYEYEISKCD ASALYRLEFK LVDGKKSTKG KTTNDSVADL QKQLRKLTAE  420
FPSDNKRSVK GRAKATSKDG VGNIYSAPNR MEPTTEGFNY ETGASYDYLV DDLNGYYLT*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028085754.1	0.0	transcription factor VOZ1-like
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A2R6QLC1	0.0	A0A2R6QLC1_ACTCH; Transcription factor like
STRING	VIT_10s0003g00500.t01	0.0	(Vitis vinifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2818	24	54

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]