PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn208531
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family B3
Protein Properties Length: 443aa    MW: 50001.6 Da    PI: 8.4508
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn208531genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.35.1e-17241331199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 f+k  ++s+v+   +l +p++f e h+  +  + t++l d+s ++++ k+ ++k+     l++GW++F  a++L +gD++vF+l+++ +f  +v ++r+
  Achn208531 241 FVKLVIRSNVNIGFLLNFPRTFSEMHM--PGHDATVVLVDPSQKEYRAKYLVWKNM----LSAGWRSFSVAHKLIVGDVLVFQLIKHCKF--KVYIVRT 331
                 899999********************6..446679***************99*995....*************************99999..8888876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF022344.7E-15126166IPR003175Cyclin-dependent kinase inhibitor
Gene3DG3DSA:4.10.365.101.6E-11128167No hitNo description
SuperFamilySSF1019361.53E-22235332IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.105.4E-20237331IPR015300DNA-binding pseudobarrel domain
CDDcd100171.53E-24239330No hitNo description
SMARTSM010191.2E-20241332IPR003340B3 DNA binding domain
PROSITE profilePS5086312.506241332IPR003340B3 DNA binding domain
PfamPF023621.7E-13241330IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007050Biological Processcell cycle arrest
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0004861Molecular Functioncyclin-dependent protein serine/threonine kinase inhibitor activity
Sequence ? help Back to Top
Protein Sequence    Length: 443 aa     Download sequence    Send to blast
MEATSSAISF KRRKLNSDGD DKLVIRRYDV NSPASSENSD RAPVSRCSST NSSEFVKHDL  60
RSIDPKAESN RKRFETEIST VINCRFSRET TPSSELLAES DELDSSTAKK PLGASLCRKQ  120
LEAKMPAVAE IEEFFSAAEK CDQKRFAEKY NYDVVKDVPL EGRYQWAYRY IWLQVEDFGL  180
NSVSGPKSGG MVVLDPSAKP RSPKRKEVMV RDLYDDAKAE PSLMERVKEV QANLDVKFPT  240
FVKLVIRSNV NIGFLLNFPR TFSEMHMPGH DATVVLVDPS QKEYRAKYLV WKNMLSAGWR  300
SFSVAHKLIV GDVLVFQLIK HCKFKVYIVR TSELDEVDGA NALLHLKADT RRCNSEITNE  360
ATSISNTSRA RNLSLSNHDG FTSRRESSKA LEEACPSVGS LHARLDRLDS LALEVKEAVE  420
IQKDRRTMPG RVQTEEEQKT LQ*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6RH371e-169A0A2R6RH37_ACTCH; B3 domain-containing protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.14e-29B3 family protein