PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn160251
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 348aa    MW: 39330.5 Da    PI: 3.8494
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn160251genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM768.6e-24261481128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                 lp G+rF+P+de++v +yL +++++++l++ ++i+++++y++  P+++p + + ++ e++wyfF++r k+++       +t++g Wk+  +d+e+l+ +
  Achn160251  26 LPTGYRFDPSDEQIVIHYLMNEIRNQPLPV-DIIPRINVYSCsAPEKIPlStSKYGMENHWYFFTTRPKENP------IITSDGCWKEI-RDEEILD-G 115
                 699***************************.99********978*****5333334677********99765......5899*****87.6799999.9 PP

         NAM  97 gelvglkktLvfy.kgrapkgektdWvmheyrl 128
                 +e+vg  +tL f+ ++  ++  +t+W ++ey++
  Achn160251 116 DEVVGFMRTLRFHyEELLNDEANTNWYIDEYSA 148
                 99**********94555667789********85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.14E-2822176IPR003441NAC domain
PROSITE profilePS5100528.77926177IPR003441NAC domain
PfamPF023651.7E-1627147IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    Send to blast
MASSASSASS SHVNAIEQLN GQTIYLPTGY RFDPSDEQIV IHYLMNEIRN QPLPVDIIPR  60
INVYSCSAPE KIPLSTSKYG MENHWYFFTT RPKENPIITS DGCWKEIRDE EILDGDEVVG  120
FMRTLRFHYE ELLNDEANTN WYIDEYSANP NIFESDELDD DAKEKVSNFV VCKVRFGESM  180
ADKTCDADSN EGDINSDSDS HKEGDTDSDT ESDSDSDTKS DSDSDTESDS DSDTKNDSDS  240
DTENDLDSVE ESDSDTDSDK ERNINTDSDE KSNIDIDTNS DEERDIDTDT NSDEESDTNS  300
YEEEEERPTH TNSDEAIQIQ MMNKKKKDPT DKEVENGESM IHARKNK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6Q2H80.0A0A2R6Q2H8_ACTCH; NAC transcription factor
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.11e-17NAC-like, activated by AP3/PI