PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Achn158851

Organism

Actinidia chinensis

Taxonomic ID

3625

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia

Family

bZIP

Protein Properties

Length: 397aa MW: 42618.3 Da PI: 7.5068

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Achn158851	genome	IKGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	52	1.5e-16	335	380	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 +r+rr++kNRe+A rsR+RK+a++ eLee+v++L++eN++L+ ++ Achn158851 335 RRQRRMIKNRESAARSRARKQAYTTELEEEVAKLKEENQELRGNNG 380 79***************************************97765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.9E-12	331	393	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.243	333	376	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.8E-14	335	383	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	3.5E-15	335	380	No hit	No description
SuperFamily	SSF57959	8.13E-12	335	380	No hit	No description
CDD	cd14707	1.27E-25	335	376	No hit	No description
PROSITE pattern	PS00036	0	338	353	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence Send to blast
MNFKNYGSEP PSANGVGRLP EDFPLARQQS IYSLTFDEFQ STVGGSGKDF GSMNMDELLK 60 NIWSAEETQT MGSTNCGQES VAPGGYLQRQ GSLTLPRTLS QKTVDEVWRD IATGGGGDSN 120 LPQRQQTLKE ITLEEFLVRA GVVREEIQLP GKTSNSGFFG DLSRPGNDSA LGFGFQQMGQ 180 HTGLSNSNQI QNPIQSANLP VNVNGVRSTQ QQMYIPQPQQ QQQQQQPPSI FPKQLNLAYA 240 NPIPISNGSP GIRSGIVGNM DSPMNGNLVQ GGGMGMIGLG TGGAVTVATV SPVMPSDGRG 300 KSNGNLSSVS PVPYVFNGGL RGRKSGNAVE KVVERRQRRM IKNRESAARS RARKQAYTTE 360 LEEEVAKLKE ENQELRGNNG DAEKSGLGDD EHAARS*

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence Send to blast

MNFKNYGSEP PSANGVGRLP EDFPLARQQS IYSLTFDEFQ STVGGSGKDF GSMNMDELLK  60
NIWSAEETQT MGSTNCGQES VAPGGYLQRQ GSLTLPRTLS QKTVDEVWRD IATGGGGDSN  120
LPQRQQTLKE ITLEEFLVRA GVVREEIQLP GKTSNSGFFG DLSRPGNDSA LGFGFQQMGQ  180
HTGLSNSNQI QNPIQSANLP VNVNGVRSTQ QQMYIPQPQQ QQQQQQPPSI FPKQLNLAYA  240
NPIPISNGSP GIRSGIVGNM DSPMNGNLVQ GGGMGMIGLG TGGAVTVATV SPVMPSDGRG  300
KSNGNLSSVS PVPYVFNGGL RGRKSGNAVE KVVERRQRRM IKNRESAARS RARKQAYTTE  360
LEEEVAKLKE ENQELRGNNG DAEKSGLGDD EHAARS*

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028054015.1	1e-156	bZIP transcription factor 23-like
Swissprot	Q9M7Q4	1e-102	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A2R6RN64	0.0	A0A2R6RN64_ACTCH; ABSCISIC ACID-INSENSITIVE 5-like protein
STRING	XP_009592272.1	1e-140	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA776	24	97

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	2e-86	abscisic acid responsive elements-binding factor 2

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]