PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn152431 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | G2-like | ||||||||
Protein Properties | Length: 213aa MW: 24149.1 Da PI: 5.4474 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 30.5 | 8.2e-10 | 23 | 48 | 1 | 26 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsek 26 k+rl+Wt eLH+ F +av+qLGG++k Achn152431 23 KERLKWTDELHDLFEKAVNQLGGPDK 48 68**********************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 6.1E-8 | 21 | 49 | IPR009057 | Homeodomain-like |
Pfam | PF14379 | 4.5E-15 | 64 | 105 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence Send to blast |
MPSRAGRSFD SDTGSGRSDG SGKERLKWTD ELHDLFEKAV NQLGGPDKIP DVQVHSRIFQ 60 QCAQLNEALQ IQKEAERRLS EQLEVQRSLK LKIEAQGRYL ERIQEDLNNR INNAVKPGKA 120 FSPISMLSIC EKSNSNAMES ESDLEIDKAE AMSEEEFRGP KRLRAGDEDV FVPRYMFHSE 180 SFNQSMFLSK RNSFPWSVTS CNLPLMPSLY TL* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028075865.1 | 4e-68 | myb family transcription factor PHL7-like | ||||
TrEMBL | A0A2R6R8D9 | 1e-131 | A0A2R6R8D9_ACTCH; Myb family transcription factor | ||||
STRING | XP_006429402.1 | 2e-52 | (Citrus clementina) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA10101 | 20 | 26 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01060.1 | 2e-16 | G2-like family protein |