PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn144111
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bHLH
Protein Properties Length: 570aa    MW: 65142.8 Da    PI: 5.081
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn144111genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.23.8e-10112159455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  Achn144111 112 SHSLAERARREKISERMKVLQDLVPGC----NKVIGKALVLDEIINYIQSLQ 159
                 8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.28E-9106163No hitNo description
SuperFamilySSF474593.79E-17106176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.4E-17108176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.878108158IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.0E-7112159IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.8E-10114164IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.60.21.109.4E-141260564IPR029052Metallo-dependent phosphatase-like
SuperFamilySSF563004.4E-117266555IPR029052Metallo-dependent phosphatase-like
CDDcd074150269553No hitNo description
SMARTSM001565.3E-152283553IPR006186Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
PfamPF001492.0E-35311502IPR004843Calcineurin-like phosphoesterase domain, apaH type
PRINTSPR001142.3E-90311338IPR006186Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
PRINTSPR001142.3E-90340367IPR006186Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
PRINTSPR001142.3E-90373397IPR006186Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
PROSITE patternPS001250374379IPR006186Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
PRINTSPR001142.3E-90408434IPR006186Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
PRINTSPR001142.3E-90437464IPR006186Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
PRINTSPR001142.3E-90493513IPR006186Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
PRINTSPR001142.3E-90515531IPR006186Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0016787Molecular Functionhydrolase activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 570 aa     Download sequence    Send to blast
MVNGCAPQYD LDEIWPFPTN GGEGLGLGRV QYGPGSRQSR KQRGSAPEDE SAKNDSDCKR  60
IKTGEFGEDN LDSKTEAETD SRKQVEQNAK PPEPPKQDYI HVRARRGQAT DSHSLAERAR  120
REKISERMKV LQDLVPGCNK VIGKALVLDE IINYIQSLQG QVEFLSMKLE AVNSRIIPII  180
EGLPSKDKSY KIKRLEMIES FNFSFSCWAV NLVVLWVATV WVDRTFDFSC WAGHLFALWV  240
TTVWVDRTFD FCVHDRRERE RERMPSQADL DRQIEHLMEC KPLTEAEVKI LCDQARAILV  300
EEWNVQPVKC PVTVCGDIHG QFYDLLELFR IGGNAPDTNY LFMGDYVDRG YYSVETVTLL  360
VALKVRYRDR ITILRGNHES RQITQVYGFY DECLRKYGNA NVWKYFTDLF DYLPLTALIE  420
SQIFCLHGGL SPSLDTLDNI RALDRIQEVP HEGPMCDLLW SDPDDRCGWG ISPRGAGYTF  480
GQDIASQFNH TNGLTLISRA HQLVMEGYNW CQEKNVVTVF SAPNYCYRCG NMAAILEIGE  540
NMDQNFLQFD PAPRQIEPDA TRKTPDYFL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ie3_C0.02695699309Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform
2ie4_C0.02695699309Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform
2npp_C0.02695699309Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform
2npp_F0.02695699309Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform
3c5w_C0.026956910310PP2A C subunit
3dw8_C0.02695699309Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform
3dw8_F0.02695699309Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform
3k7v_C0.02695699309Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform
3k7w_C0.02695699309Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform
4i5l_C0.026956911311Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha
4i5l_F0.026956911311Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha
4i5n_C0.026956911311Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha
4i5n_F0.026956911311Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha
4lac_C0.026956911311Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform
5w0w_C0.026956911311Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform
5w0w_F0.026956911311Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform
5w0w_I0.026956911311Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform
5w0w_L0.026956911311Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028076684.10.0serine/threonine-protein phosphatase PP2A catalytic subunit
SwissprotQ9ZSE40.0PP2A_HEVBR; Serine/threonine-protein phosphatase PP2A catalytic subunit
TrEMBLA0A2R6QR100.0A0A2R6QR10_ACTCH; Serine/threonine-protein phosphatase
STRINGXP_004509911.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.13e-51BIG PETAL P