PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Achn131571

Organism

Actinidia chinensis

Taxonomic ID

3625

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia

Family

bZIP

Protein Properties

Length: 432aa MW: 47287.2 Da PI: 9.7869

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Achn131571	genome	IKGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	51.3	2.5e-16	353	404	5	56
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+k+ ee+ ++ Achn131571 353 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELRKKQEEILEMW 404 79****************************************9987776654 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.5E-15	342	400	No hit	No description
SMART	SM00338	2.6E-14	349	415	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.668	351	400	IPR004827	Basic-leucine zipper domain
CDD	cd14707	5.11E-28	353	403	No hit	No description
Pfam	PF00170	3.3E-14	353	405	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.75E-11	353	403	No hit	No description
PROSITE pattern	PS00036	0	356	371	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009414	Biological Process	response to water deprivation
GO:0009651	Biological Process	response to salt stress
GO:0009738	Biological Process	abscisic acid-activated signaling pathway
GO:0010255	Biological Process	glucose mediated signaling pathway
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0000976	Molecular Function	transcription regulatory region sequence-specific DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence Send to blast
MNFRNFENEA RVELGAGGGG RPPGIFPLAR QSSVYSLTFD EFQSTIGGSE KDFGSMNMDE 60 LLKNIWSAEE IQTLGSTSVG QEGVASGGYL QRQGSLTLPR TLSQKTVDEV WRDLAKESSG 120 GTDWNSAGGM NLPQRQRTFG EMTLEEFLVR AGVVREDVQL PMKPNNNGFF GDLTGSGNNN 180 GVGIGFQQMG RNMGLVGNRI PEVNNQTAIQ SANLPLNVNG VRSSQQQLFM PQQQQQQQHQ 240 QLFPKQPTLA YTNPMPIPSS TQLNSQGIRG GIVGITDQSM NGNLVQSGAL QGGGMGMIGF 300 WAGAVTVATG SPASDGLARS NGDMSSVSPV PYVFNGGLRG RKGNHPVEKV VERRQRRMIK 360 NRESAARSRA RKQAYTMELE AEVAKLKEEN EELRKKQEEI LEMWKNQVLE MMNTELGVKR 420 RCLRRTQTGP W*

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence Send to blast

MNFRNFENEA RVELGAGGGG RPPGIFPLAR QSSVYSLTFD EFQSTIGGSE KDFGSMNMDE  60
LLKNIWSAEE IQTLGSTSVG QEGVASGGYL QRQGSLTLPR TLSQKTVDEV WRDLAKESSG  120
GTDWNSAGGM NLPQRQRTFG EMTLEEFLVR AGVVREDVQL PMKPNNNGFF GDLTGSGNNN  180
GVGIGFQQMG RNMGLVGNRI PEVNNQTAIQ SANLPLNVNG VRSSQQQLFM PQQQQQQQHQ  240
QLFPKQPTLA YTNPMPIPSS TQLNSQGIRG GIVGITDQSM NGNLVQSGAL QGGGMGMIGF  300
WAGAVTVATG SPASDGLARS NGDMSSVSPV PYVFNGGLRG RKGNHPVEKV VERRQRRMIK  360
NRESAARSRA RKQAYTMELE AEVAKLKEEN EELRKKQEEI LEMWKNQVLE MMNTELGVKR  420
RCLRRTQTGP W*

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00186	DAP	Transfer from AT1G45249	Download

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028054015.1	0.0	bZIP transcription factor 23-like
Swissprot	Q9M7Q4	1e-121	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A2R6R3B9	0.0	A0A2R6R3B9_ACTCH; ABSCISIC ACID-INSENSITIVE 5-like protein
STRING	XP_009592272.1	1e-176	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA776	24	97

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	1e-100	abscisic acid responsive elements-binding factor 2

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]