PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn126871
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bZIP
Protein Properties Length: 428aa    MW: 48269.1 Da    PI: 8.3739
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn126871genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.54.3e-11136176545
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                 k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Achn126871 136 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQEL 176
                 7789************************8766666655544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.2E-8129178No hitNo description
SMARTSM003382.3E-7132218IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.289134178IPR004827Basic-leucine zipper domain
PfamPF001702.8E-8136176IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.44E-7136178No hitNo description
CDDcd147081.77E-20136180No hitNo description
PROSITE patternPS000360139154IPR004827Basic-leucine zipper domain
PfamPF141441.7E-30227301IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    Send to blast
MFILFRFFFL WVCSKDPGAY DLGELDQALF LYFDGQDHPS AHVQDQRQNS GMRPPTLNIF  60
PSQPMHIEPL PTKTSVGLVS SSNSGYKRPP EPSMESSKPK KDGLDQAPHK AIKREGHRKG  120
PTSSSEQEGP KTPDPKTLRR LAQNREAARK SRLRKKAYVQ QLESSRIKLT QLEQELQRAR  180
SQGVFFGGGG GLLGGDQGIP MINNISSDAA VFDMEYSRWV DEHHRLMCEL RLAVQEHIPE  240
NELRLFVDKC LAHYDELMNL KSMVAKSDVF HLISGIWKSA AERCFLWIGG LRPSDLIKII  300
ANQIEPLTEQ QLLGICGMQQ STQEAEEALS QGLEALNQSL SDTIASDSLS YPPNMGNYMG  360
QMAIAMNKLS TLEGFVRQAD NLRHQTIHRL HQILTTRQAA RCFLAMAEYF HRLRALSSLW  420
LARPRQE*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY9980182e-51AY998018.1 Nicotiana tabacum TGA10 transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028108904.10.0bZIP transcription factor TGA10
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A2R6QV670.0A0A2R6QV67_ACTCH; Transcription factor like
STRINGXP_010111398.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22792145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-169bZIP family protein