PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn124481
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bZIP
Protein Properties Length: 336aa    MW: 36857 Da    PI: 5.4568
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn124481genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_155.31.4e-17161215461
                 XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                 +kr +r+ +NRe+ArrsR RK+a + eLe+ v++L +eN++L    ++l++ +++ k+
  Achn124481 161 VKRIKRMVSNRESARRSRSRKQAHLVELEQQVDQLRGENSSLF---KQLTDAAQQFKD 215
                 79**************************************999...777777776665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.9E-13156213No hitNo description
SMARTSM003383.1E-18158222IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.013160214IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.62E-12161211No hitNo description
PfamPF001701.2E-14161210IPR004827Basic-leucine zipper domain
CDDcd147021.28E-6163213No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MESGKSGRRR MLGDMKRSPS QLALEEFIML GDMKRSPSQL ALEEFITKYH HNSNSDDDED  60
EEDLSIFHDP DALLTALHQH ADCLADVSAP FRNRGWRLSS FDPAIIVFDF VKVSSPNSAV  120
KPRGRDNKGT GATSGSSGEQ SDEDDIEIGG QCEQSTEPVD VKRIKRMVSN RESARRSRSR  180
KQAHLVELEQ QVDQLRGENS SLFKQLTDAA QQFKDSTTNN RVLKSDVEAL RAKVKLAEDM  240
VARGSLKSSL SFLLQNHLGI SQSFNMCRFG GIVSPTITVG GGDDVSFPGI TQNSNLGVEN  300
ADAINGNVKN GIISDAVSCV SENWSWEPHV PTMSK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1174181RRSRSRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028078814.11e-96basic leucine zipper 9
TrEMBLA0A2R6QYX70.0A0A2R6QYX7_ACTCH; Basic leucine zipper like
STRINGVIT_04s0008g02750.t012e-77(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA81392229
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.19e-48basic leucine zipper 9