PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn123771 | ||||||||
Common Name | EIL4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | EIL | ||||||||
Protein Properties | Length: 608aa MW: 68488 Da PI: 6.1039 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 429.7 | 3e-131 | 38 | 386 | 1 | 323 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekv 99 e+l++rmwkd+++lkr+ker+k +++ a++++k +++++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+gasd++raWWkekv Achn123771 38 EDLERRMWKDRIKLKRIKERQKLA--AQQ-AAEKEKPKQMSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAWWKEKV 133 89***************9999963..355.599****************************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----G CS EIN3 100 efdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkp 198 +fd+ngpaai+ky+a++l+ +e++ ++ ++++ l++lqD+tlgSLLs+lmqhcdppqr++plekgv+pPWWPtG+e+ww +lgl+k q+ ppykkp Achn123771 134 KFDKNGPAAITKYEAECLAKVKEERI--QKGNSQSILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPTGSEEWWMKLGLPKGQS-PPYKKP 229 ******************98877776..77999***********************************************************.9***** PP GG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.........XXXXXXXXXXXXXXXXXXXXXXX CS EIN3 199 hdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.........slrkqspkvtlsceqkedvegkk 288 hdlkk+wkv+vLtavikhmsp+i++ r+l+r+sk+lqdkm+akes ++l vl++ee+++++ s ++ r++++k +s+++++dv+g + Achn123771 230 HDLKKMWKVGVLTAVIKHMSPDIAKTRRLVRKSKCLQDKMTAKESLIWLGVLSREESLIRQSSGDNGtsgttevpsGGRREKKKPSVSSDSDYDVDGID 328 ***************************************************************9944446777876667799999***********666 PP XXX.XXXXXXXXXX.......................XXXXXXXXXXXXXXXXXXXXX CS EIN3 289 eskikhvqavktta.......................gfpvvrkrkkkpsesakvssk 323 + + ++++++++ + + +rk+++++s+ ++++ Achn123771 329 DGVGSVSSKDDERDqlpdvepsnqprnstarrlqdkeRREEQPRRKRPRVRSSPTNQQ 386 6666766666666656666666666666666555555445555555555555555554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 2.4E-125 | 38 | 285 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 4.4E-70 | 161 | 291 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 1.7E-60 | 166 | 288 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0042762 | Biological Process | regulation of sulfur metabolic process | ||||
GO:0071281 | Biological Process | cellular response to iron ion | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 608 aa Download sequence Send to blast |
MGVMEEIGVD ISSDIEVDEI RCENIAEKDV SDEEIEAEDL ERRMWKDRIK LKRIKERQKL 60 AAQQAAEKEK PKQMSDQARR KKMSRAQDGI LKYMLKLMEV CKARGFVYGI IPEKGKPVSG 120 ASDNIRAWWK EKVKFDKNGP AAITKYEAEC LAKVKEERIQ KGNSQSILQD LQDATLGSLL 180 SSLMQHCDPP QRKYPLEKGV PPPWWPTGSE EWWMKLGLPK GQSPPYKKPH DLKKMWKVGV 240 LTAVIKHMSP DIAKTRRLVR KSKCLQDKMT AKESLIWLGV LSREESLIRQ SSGDNGTSGT 300 TEVPSGGRRE KKKPSVSSDS DYDVDGIDDG VGSVSSKDDE RDQLPDVEPS NQPRNSTARR 360 LQDKERREEQ PRRKRPRVRS SPTNQQAAPY SREHLHDEPI NTLPDINQTD VISHMHGSQH 420 ENNANETLRP LDKDLQGHYQ LPASEFDQIS TIPSADVIPT DNIFAGGRPI PYPVVQENSQ 480 LHHGPTYDFY IPSLAYMPSG DGQQTQMAFT EPWDRPVDSG VNASALRRNE NDIPNPGGDM 540 IQYLKGTFQN EQDRPVMNHF GSPLNSLSLD YGGLNSPFNL EIHGTSSIDT SDIDFLLDDE 600 LIQCFGA* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wij_A | 9e-74 | 165 | 296 | 9 | 140 | ETHYLENE-INSENSITIVE3-like 3 protein |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00233 | DAP | Transfer from AT1G73730 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KF319044 | 0.0 | KF319044.1 Actinidia chinensis EIN3-like protein EIL4 (EIL4) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028106973.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein isoform X2 | ||||
Swissprot | O23116 | 0.0 | EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
TrEMBL | A0A2R6P8T4 | 0.0 | A0A2R6P8T4_ACTCH; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
STRING | XP_009364731.1 | 0.0 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA304 | 23 | 178 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 1e-159 | ETHYLENE-INSENSITIVE3-like 3 |