PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn110491 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | G2-like | ||||||||
Protein Properties | Length: 149aa MW: 16074.8 Da PI: 6.2942 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 42.2 | 1.8e-13 | 20 | 45 | 26 | 51 |
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQ 51 +AtPk++l+lm+v gLt++hvkSHLQ Achn110491 20 EATPKQVLQLMDVRGLTISHVKSHLQ 45 7************************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 3.4E-11 | 19 | 45 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.4E-9 | 19 | 46 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence Send to blast |
MATLVAMRHL PLENWTEDSE ATPKQVLQLM DVRGLTISHV KSHLQIAVEE DQNRVSSKRS 60 KFGNTDIAQA EDEVASGCGL SLSLSLHHPS AQRSLHHPSA QRSNASSTSE ISEAISSYSR 120 SNFNDCSGFS LSEKHSINLD LSIALCGT* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028117629.1 | 8e-26 | uncharacterized protein LOC114315240 | ||||
TrEMBL | A0A2R6RE52 | 4e-54 | A0A2R6RE52_ACTCH; Myb family transcription factor | ||||
STRING | VIT_01s0137g00050.t01 | 2e-24 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5433 | 22 | 38 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14600.1 | 2e-08 | G2-like family protein |