PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn091661 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | bHLH | ||||||||
Protein Properties | Length: 235aa MW: 27437.3 Da PI: 8.6206 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 14.7 | 5.6e-05 | 80 | 117 | 5 | 47 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekA 47 h ++Er RR++ +++++ L +llP+ +K K +i+ A Achn091661 80 HMINERMRREKEKHSYSALHSLLPPG-----TKRCKNSIVNAA 117 7899********************95.....455555555555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.96E-9 | 73 | 138 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 10.969 | 75 | 124 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.82E-4 | 79 | 126 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 2.1E-5 | 80 | 140 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence Send to blast |
MEEFFRFDLP ENFFWVEQEI LPATNQSAFE RYEDRGNGWV PKSSSRNVNK RMIEFMRRNW 60 NPPPTTERTE IDEREKGFRH MINERMRREK EKHSYSALHS LLPPGTKRCK NSIVNAAAKE 120 LQELRDYREE LERENREIEA ILAVSREREK LIAEGAKIRL RVANPSSGIV SMVEVLKCLK 180 KMGSTTSCIQ SKFSAQELSA VLEIGPEIEA AEVEKAVQKT LFQVERKLHC YFQR* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028099372.1 | 6e-72 | transcription factor bHLH92 isoform X1 | ||||
Refseq | XP_028099373.1 | 3e-72 | transcription factor bHLH92 isoform X2 | ||||
TrEMBL | A0A2R6Q3F1 | 1e-167 | A0A2R6Q3F1_ACTCH; Transcription factor bHLH92 like | ||||
STRING | EMJ28464 | 1e-62 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA12463 | 18 | 21 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43650.1 | 4e-31 | bHLH family protein |