PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn084391
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bZIP
Protein Properties Length: 272aa    MW: 28539.3 Da    PI: 6.5729
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn084391genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_166.93.4e-21173235163
                 XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                 e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN + ++el++++ e+++l +++
  Achn084391 173 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENATIRSELSRIRSEYEQLVAQN 235
                 89********************************************************98877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165961.6E-5212149No hitNo description
Gene3DG3DSA:1.20.5.1705.8E-17169233No hitNo description
SMARTSM003382.5E-21173237IPR004827Basic-leucine zipper domain
PfamPF001701.9E-19173235IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.093175238IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.06E-11176233No hitNo description
CDDcd147024.05E-21178228No hitNo description
PROSITE patternPS000360180195IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MEADGKLSEG KEKLPIKRSK GSLGSLNMIT GKNNEPGKLS GASTNGVSSK SAESASEGSS  60
EGSDANSEND SQIKSGRSQD SFEAEASQNG GAMHGSQNGG PNAVPTMVNP TMSIVPVQAV  120
GAPGGIPGPT TNLNIGMDNW GTPTSSTLPA MRGKAPPTPV AGGMVNAGSL QDERELKRQR  180
RKQSNRESAR RSRLRKQAEC DELAQRAEAL KEENATIRSE LSRIRSEYEQ LVAQNTSLKE  240
RLGEGPGQED DRHVGSDTQP TGQKELVQSG Q*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1189195RRSRLRK
2189196RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028074807.11e-142bZIP transcription factor 16-like isoform X5
SwissprotQ501B24e-90BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A2R6PDM61e-176A0A2R6PDM6_ACTCH; BZIP transcription factor
STRINGEMJ104011e-133(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30652446
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.12e-77basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]