PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn080851
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 470aa    MW: 54393.2 Da    PI: 6.4282
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn080851genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM79.47.7e-2511719451128
         NAM  51 vkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkge.ktdWvmheyrl 128
                 ++++e+ewyfF+ rd+ky++g+r++r+t +g+Wka+g ++++ s +++++g kktL+f +g+ ++g+ kt+W+mhey+l
  Achn080851 117 LNEREREWYFFTLRDRKYPNGSRSSRKTVDGFWKAKGANNPIQS-NNRTIGYKKTLIFCEGNIRDGKtKTNWLMHEYTL 194
                 456789*************************************9.999************98877755*********98 PP
2NAM133.41.6e-412754021128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                 lppG+rF+Ptdeelv +yL  kv g++l++   i+++++y+++P++L +  +++++e+e yfF+ rd+ky++g+r++r+t +g+Wka g +++++s ++
  Achn080851 275 LPPGYRFQPTDEELV-YYLIDKVLGRPLPI-VPIRNINLYNYNPQQLSQeyELNERERERYFFTLRDRKYPNGSRSSRKTVDGFWKANGASNPIKS-NN 370
                 79*************.**************.66**************8534666778899************************************.99 PP

         NAM  98 elvglkktLvfykgrapkge.ktdWvmheyrl 128
                 +++g kktLvf +g+a++g+ kt+W+mhey+l
  Achn080851 371 RTIGYKKTLVFCEGNARDGKtKTNWLMHEYTL 402
                 9*************99998669********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100523.84664211IPR003441NAC domain
PfamPF023653.6E-1297194IPR003441NAC domain
SuperFamilySSF1019418.76E-26119199IPR003441NAC domain
SuperFamilySSF1019418.76E-47269428IPR003441NAC domain
PROSITE profilePS5100544.461275429IPR003441NAC domain
PfamPF023655.5E-21276402IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    Send to blast
MEEMYEEGGV NGDTSDPTTQ GHSRRSVSPM QFTAHSTIND LGSPMVLAER SEREMAVDAT  60
RRSCSLDARH SPIAFACVIV EWRRSCTMSK ADFSHLLLPR MEEMYEEGGV NGDEYELNER  120
EREWYFFTLR DRKYPNGSRS SRKTVDGFWK AKGANNPIQS NNRTIGYKKT LIFCEGNIRD  180
GKTKTNWLMH EYTLELNNSS ATIGLGVVQS KNNKLDPIKG RSNNKEEDDD EQSNNNQGQQ  240
QGNFYFTKWF TMEEMYEEGG VNGGASSIEY YMDSLPPGYR FQPTDEELVY YLIDKVLGRP  300
LPIVPIRNIN LYNYNPQQLS QEYELNERER ERYFFTLRDR KYPNGSRSSR KTVDGFWKAN  360
GASNPIKSNN RTIGYKKTLV FCEGNARDGK TKTNWLMHEY TLELKNSSAT SREPRDMKLD  420
WVLCKIKNNK LDPIKGRSNN NQEQEDDDEQ SNNHQGQQQG NFYFTKWFT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-3911343015169Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1513268
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.14e-38NAC-like, activated by AP3/PI