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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Achn075701 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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| Family |
BBR-BPC |
| Protein Properties |
Length: 283aa MW: 31043.7 Da PI: 8.1472 |
| Description |
BBR-BPC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Achn075701 | genome | IKGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GAGA_bind | 307.7 | 3.9e-94 | 1 | 282 | 32 | 301 |
GAGA_bind 32 iaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensla....salpvgvqvlsgtksidslqqlse.pqledsave 125
+aerda+irern+al e++ a+aerdma lqrd+ +aern a+ erd++l+al+++e s++ s ++ g ++ g k++++ q++ p+l+++a++
Achn075701 1 MAERDAAIRERNAALDERRRAFAERDMAMLQRDMGIAERNTAIEERDKALAALQFRESSMNenymSPHSLGDGIACGGKHLHHQYQVHStPHLAETAYD 99
78********************************************************999886555556788999*****998885555********9 PP
GAGA_bind 126 .lreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesader.........skaekksidlvlngvslDestlPvPvCs 214
+ ++ p++++ +++ ++++ k ++ k+pke k++++kk+++ + k e+ + + l+ln+v +Dest+P P+Cs
Achn075701 100 pSETPTSPSEIPTSNSFQSTGVASNTAKPRKVKQPKEIKETSTKKSKSPRQGKRGIEQ---DlggddedldGPFVVLTDSLGLNQVIFDESTMPGPICS 195
6566666678888888888888888888888899998888877664433333322222...11233344445566677889****************** PP
GAGA_bind 215 CtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
CtGa++ CYkWGnGGWqSaCCtttiSvyPLP+++++r+aR++grKmS+gaf klL++LaaeG+d +p+DLkdhW kHGtn++ t++
Achn075701 196 CTGAPQPCYKWGNGGWQSACCTTTISVYPLPQMSNKRHARVGGRKMSGGAFAKLLNRLAAEGHDPYTPLDLKDHWSKHGTNRYSTLK 282
***********************************************************************************9986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 283 aa
Download sequence Send
to blast |
MAERDAAIRE RNAALDERRR AFAERDMAML QRDMGIAERN TAIEERDKAL AALQFRESSM 60
NENYMSPHSL GDGIACGGKH LHHQYQVHST PHLAETAYDP SETPTSPSEI PTSNSFQSTG 120
VASNTAKPRK VKQPKEIKET STKKSKSPRQ GKRGIEQDLG GDDEDLDGPF VVLTDSLGLN 180
QVIFDESTMP GPICSCTGAP QPCYKWGNGG WQSACCTTTI SVYPLPQMSN KRHARVGGRK 240
MSGGAFAKLL NRLAAEGHDP YTPLDLKDHW SKHGTNRYST LK*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. {ECO:0000269|PubMed:14731261}. |
