PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn070531
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 502aa    MW: 55508.6 Da    PI: 4.4083
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn070531genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM60.45.8e-1961212128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100
                 p+Gf+F+Ptd++l+++yL +k++gk+l++e +i e+    +     +++ ++++++ yfF++ +kk++   +  r++ +g+W+++ + + + +++++++
  Achn070531   6 PAGFKFRPTDQQLIHDYLVNKIDGKELPFEGIILELLSEIF-----RARNESGDTRSYFFTRLKKKAE---NYCRTVGNGTWRSQYS-RVINDSESNTI 95 
                 89***************************888777633222.....23445688999*****999876...6899999*****8866.899999***** PP

         NAM 101 glkktLvfykgrapkgektdWvmheyrl 128
                 g+k+++ + +  + + ++ +W+m e++l
  Achn070531  96 GIKRSFEYMN--NGSVQHKKWIMMEFSL 121
                 ********95..44455899******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.18E-184141IPR003441NAC domain
PROSITE profilePS5100522.4955143IPR003441NAC domain
PfamPF023652.0E-156121IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 502 aa     Download sequence    Send to blast
MAKTIPAGFK FRPTDQQLIH DYLVNKIDGK ELPFEGIILE LLSEIFRARN ESGDTRSYFF  60
TRLKKKAENY CRTVGNGTWR SQYSRVINDS ESNTIGIKRS FEYMNNGSVQ HKKWIMMEFS  120
LAGVSLEQPR SSKDYVICML KKSRVGKHGM ETMQSNRNGD EALANMPSGC FNNKRIKLTA  180
TQNQKMENDT SAKLPSGNSS YAVIKSAPIV GEQVGLIHRE AGVETLEQIM RDLLAPEPSM  240
ENVANVVVAD TLATLLPSGH YAVPDSILPF DSMPPLMQAK PAPIVDEEGD YALGENEVRM  300
QPSIADQSLH SSNDEFAVLN HLWSLASAPE VTAAENDVGN LVQPSIADQS LLLSNPEYAV  360
LDYICSLASA PYVTEVESDF EILEQPCMPA PESLPADSPG HAVLNSIISL ASPAPMVDPS  420
IVQDTFLNKY PEVTAAKIDD GILEQTAPTV EPTAKIDNRI WLESFAEDLL SVQHDLPLEE  480
NDQEHGELLE FPNPTYDWLF R*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6PEF30.0A0A2R6PEF3_ACTCH; NAC domain-containing protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01520.12e-13NAC domain containing protein 67