PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Achn043391

Organism

Actinidia chinensis

Taxonomic ID

3625

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia

Family

VOZ

Protein Properties

Length: 521aa MW: 57999 Da PI: 5.8388

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Achn043391	genome	IKGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	429.8	3.8e-132	238	454	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdls 99 pppsaflgpkcalwdc+rp+q +w+qdycssfha+lalneg+pg+tpvlrp+gi+lkdgllfaalsak+ gk+vgipe egaatakspwna+elfdl+ Achn043391 238 PPPSAFLGPKCALWDCPRPSQTLDWCQDYCSSFHAALALNEGPPGMTPVLRPGGIGLKDGLLFAALSAKALGKDVGIPEWEGAATAKSPWNAPELFDLT 336 89*********************************************************************************************** PP VOZ 100 llegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakg 198 +legetirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+e+gglkrsyymdpqp + fewhlyeyein++da+alyrle+klv++kksak+ Achn043391 337 VLEGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEYGGLKRSYYMDPQPRKDFEWHLYEYEINKCDACALYRLEFKLVEGKKSAKT 435 *********************************************************************************************** PP VOZ 199 kvskdsladlqkklgrlta 217 k+++ds+adlqk+lgrlta Achn043391 436 KLTNDSVADLQKQLGRLTA 454 ***************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 521 aa Download sequence Send to blast
MRKGSKSGGC KTASHQHYKD RAKNRVDDLQ GMFTDLQSAR KESRSIDVAV LEEQVHQMLR 60 EWKNELNEPS PAASLQDGSL GSFSSDIYRL LHLCEEEDDA TSGLAAPKPE PDAPKVGGNA 120 GFQEVCKGYT WLLTQNLGNV QGFSVNQGPQ QQEFQLVDQC KGPPQQQEFQ LVDQCKGPPS 180 VVQNLGVNNL GFQSHLDYHA YDLHQDVEQN FCPGLDGTGL YGEDAMRQIS GFLPSICPPP 240 SAFLGPKCAL WDCPRPSQTL DWCQDYCSSF HAALALNEGP PGMTPVLRPG GIGLKDGLLF 300 AALSAKALGK DVGIPEWEGA ATAKSPWNAP ELFDLTVLEG ETIREWLFFD KPRRAFESGN 360 RKQRSLPDYN GRGWHESRKQ VMNEYGGLKR SYYMDPQPRK DFEWHLYEYE INKCDACALY 420 RLEFKLVEGK KSAKTKLTND SVADLQKQLG RLTAELPSEN KRSVKGRTTK AISNDSVGNT 480 YSAPIRLTPA REGFDYGTGA PYDYLVDNLN GYYLTYMHKE *

Sequence ? help Back to Top

Protein Sequence Length: 521 aa Download sequence Send to blast

MRKGSKSGGC KTASHQHYKD RAKNRVDDLQ GMFTDLQSAR KESRSIDVAV LEEQVHQMLR  60
EWKNELNEPS PAASLQDGSL GSFSSDIYRL LHLCEEEDDA TSGLAAPKPE PDAPKVGGNA  120
GFQEVCKGYT WLLTQNLGNV QGFSVNQGPQ QQEFQLVDQC KGPPQQQEFQ LVDQCKGPPS  180
VVQNLGVNNL GFQSHLDYHA YDLHQDVEQN FCPGLDGTGL YGEDAMRQIS GFLPSICPPP  240
SAFLGPKCAL WDCPRPSQTL DWCQDYCSSF HAALALNEGP PGMTPVLRPG GIGLKDGLLF  300
AALSAKALGK DVGIPEWEGA ATAKSPWNAP ELFDLTVLEG ETIREWLFFD KPRRAFESGN  360
RKQRSLPDYN GRGWHESRKQ VMNEYGGLKR SYYMDPQPRK DFEWHLYEYE INKCDACALY  420
RLEFKLVEGK KSAKTKLTND SVADLQKQLG RLTAELPSEN KRSVKGRTTK AISNDSVGNT  480
YSAPIRLTPA REGFDYGTGA PYDYLVDNLN GYYLTYMHKE *

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028055355.1	0.0	transcription factor VOZ1-like
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A2R6QAA4	0.0	A0A2R6QAA4_ACTCH; Transcription factor like
STRING	VIT_10s0003g00500.t01	0.0	(Vitis vinifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2818	24	54

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]