PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn033301 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | VOZ | ||||||||
Protein Properties | Length: 501aa MW: 55901.7 Da PI: 5.6749 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 430 | 3.5e-132 | 218 | 434 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdls 99 pppsaflgpkcalwdc+rp+q +w+qdycssfha+lalneg+pg+tpvlrp+gi+lkdgllfaalsak+ gk+vgipe egaatakspwna+elfdl+ Achn033301 218 PPPSAFLGPKCALWDCPRPSQTLDWCQDYCSSFHAALALNEGPPGMTPVLRPGGIGLKDGLLFAALSAKALGKDVGIPEWEGAATAKSPWNAPELFDLT 316 89************************************************************************************************* PP VOZ 100 llegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakg 198 +legetirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+e+gglkrsyymdpqp + fewhlyeyein++da+alyrle+klv++kksak+ Achn033301 317 VLEGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEYGGLKRSYYMDPQPRKDFEWHLYEYEINKCDACALYRLEFKLVEGKKSAKT 415 *************************************************************************************************** PP VOZ 199 kvskdsladlqkklgrlta 217 k+++ds+adlqk+lgrlta Achn033301 416 KLTNDSVADLQKQLGRLTA 434 *****************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 501 aa Download sequence Send to blast |
MRKGSKSGGC KTASHQHYKD RAKNRVDDLQ GMFTDLQSAR KESRSIDVAV LEEQVHQMLR 60 EWKNELNEPS PAASLQDGSL GSFSSDIYRL LHLCEEEDDA TSGLAAPKPE PDAPKVGGNA 120 GFQEVIIWPQ QQEFQLVDQC KGPPQQQEFQ LVDQCKGPPS VVQNLGVNNL GFQSHLDYHA 180 YDLHQDVEQN FCPGLDGTGL YGEDAMRQIS GFLPSICPPP SAFLGPKCAL WDCPRPSQTL 240 DWCQDYCSSF HAALALNEGP PGMTPVLRPG GIGLKDGLLF AALSAKALGK DVGIPEWEGA 300 ATAKSPWNAP ELFDLTVLEG ETIREWLFFD KPRRAFESGN RKQRSLPDYN GRGWHESRKQ 360 VMNEYGGLKR SYYMDPQPRK DFEWHLYEYE INKCDACALY RLEFKLVEGK KSAKTKLTND 420 SVADLQKQLG RLTAELPSEN KRSVKGRTTK AISNDSVGNT YSAPIRLTPA REGFDYGTGA 480 PYDYLVDNLN GYYLTYMHKE * |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028055355.1 | 0.0 | transcription factor VOZ1-like | ||||
Swissprot | Q9SGQ0 | 0.0 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | A0A2R6QAA4 | 0.0 | A0A2R6QAA4_ACTCH; Transcription factor like | ||||
STRING | VIT_10s0003g00500.t01 | 0.0 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2818 | 24 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28520.2 | 0.0 | vascular plant one zinc finger protein |
Publications ? help Back to Top | |||
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