PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AA74G00019 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
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Family | WRKY | ||||||||
Protein Properties | Length: 112aa MW: 13046.5 Da PI: 4.3129 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 36.4 | 1e-11 | 3 | 43 | 22 | 59 |
EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 22 rsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 sYYrC a +C +kk+v++ +++p+++ ++Y g+H ++ AA74G00019 3 LSYYRCLNAkhqKCDAKKQVQKIQDNPSLFRTIYIGQHVCQ 43 59****765566**************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 9.592 | 1 | 45 | IPR003657 | WRKY domain |
Pfam | PF03106 | 6.2E-11 | 3 | 43 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 1.3E-10 | 4 | 43 | IPR003657 | WRKY domain |
SMART | SM00774 | 7.1E-7 | 4 | 44 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 4.18E-10 | 4 | 43 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 112 aa Download sequence Send to blast |
MQLSYYRCLN AKHQKCDAKK QVQKIQDNPS LFRTIYIGQH VCQASIILYT NNNDNIHNST 60 IQFENQDQTM TDSNLPLLVS VETDNYVVDD DLDLSLINHE EFWLTNGDTM DF |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | AA74G00019 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM5609 | 18 | 47 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66560.1 | 9e-19 | WRKY DNA-binding protein 64 |