PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA74G00016
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family WRKY
Protein Properties Length: 270aa    MW: 30923.5 Da    PI: 5.9056
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA74G00016genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY26.31.4e-0889109121
                 ---SS-EEEEEEE--TT-SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefp 21 
                 ldDg++WrKYGqK++kg  + 
  AA74G00016  89 LDDGFEWRKYGQKTIKGFLYQ 109
                 59**************97665 PP
2WRKY32.22.1e-101541912359
                 EEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY  23 sYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +Y+rCt   +C++kk+v++ +e+p v  ++Y+geH ++
  AA74G00016 154 NYFRCTKDkNCKAKKQVQQIQENPPVYRTIYNGEHFCQ 191
                 6******99**************************886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081113.8584193IPR003657WRKY domain
Gene3DG3DSA:2.20.25.809.7E-2284109IPR003657WRKY domain
SuperFamilySSF1182905.23E-786110IPR003657WRKY domain
SMARTSM007747.9E-2889192IPR003657WRKY domain
PfamPF031067.0E-690110IPR003657WRKY domain
SuperFamilySSF1182904.58E-11145193IPR003657WRKY domain
Gene3DG3DSA:2.20.25.809.7E-22153193IPR003657WRKY domain
PfamPF031062.8E-10154191IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MAAIRRGQES VNTLQMLINI DSDGSRDPTV AIHLDNILHS FSLLSCFLHS LKSKSTAKES  60
LNKKSSRDDD EEEGKGCVFH TVDSPTPILD DGFEWRKYGQ KTIKGFLYQR VGDGLARGLA  120
DTGLRFSAIL GFTNFLQSNF QRFSESYHQW RKGNYFRCTK DKNCKAKKQV QQIQENPPVY  180
RTIYNGEHFC QTPVFLYSTD NDTNSSTKVF RFNNPNQAVT DSKLPLLVPV DSVEAVDHTS  240
YDEFDDFFLN PEQFWLPEFS YLPGEDTMFS
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA74G00016
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM56091847
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66560.12e-28WRKY DNA-binding protein 64