PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AA49G00049

Organism

Aethionema arabicum

Taxonomic ID

228871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema

Family

VOZ

Protein Properties

Length: 482aa MW: 53475 Da PI: 5.9313

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AA49G00049	genome	VEGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	443.6	2.4e-136	206	422	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdls 99 pppsaflgpkcalwdc+rpaqg++w+qdycssfha+la+neg+pg++pv+rp+gi+lkdgllfaalsak+ gk+vgipecegaatakspwna+elfdl+ AA49G00049 206 PPPSAFLGPKCALWDCPRPAQGFDWFQDYCSSFHAALAFNEGPPGMNPVVRPGGIGLKDGLLFAALSAKAGGKDVGIPECEGAATAKSPWNAPELFDLA 304 89*********************************************************************************************** PP VOZ 100 llegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakg 198 +le+et+rewlffdkprrafesgnrkqrslpdy+grgwhesrkq+m+efgglkrsyymdpqp+++fewhlyeyein++da+alyrlelklvd+kk++kg AA49G00049 305 VLESETLREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQIMNEFGGLKRSYYMDPQPLHHFEWHLYEYEINKCDACALYRLELKLVDGKKNSKG 403 *********************************************************************************************** PP VOZ 199 kvskdsladlqkklgrlta 217 k+s+ds+adlqk++grlta AA49G00049 404 KLSNDSVADLQKQMGRLTA 422 ***************97 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009408	Biological Process	response to heat
GO:0009414	Biological Process	response to water deprivation
GO:0009631	Biological Process	cold acclimation
GO:0009816	Biological Process	defense response to bacterium, incompatible interaction
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0048578	Biological Process	positive regulation of long-day photoperiodism, flowering
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence Send to blast
MTGKRSKTNC RSASHKLFKD KAKNRVDDLQ GMLLDLQFAR KESRSSDVTL LEEQVNQMLR 60 EWKSELNEPS PASSLQQQGG TLGSFSSDIC RLLQLCDEED DATSKLAAPK PEPADQNMQA 120 GKTAVFQKGY NLVPGKAEQG FPLVDRCKDS SLVVGNNFDG STHLEYHQFD LQQEFGPNFS 180 GGFSDCPNYS GDGALDISTF IPTICPPPSA FLGPKCALWD CPRPAQGFDW FQDYCSSFHA 240 ALAFNEGPPG MNPVVRPGGI GLKDGLLFAA LSAKAGGKDV GIPECEGAAT AKSPWNAPEL 300 FDLAVLESET LREWLFFDKP RRAFESGNRK QRSLPDYNGR GWHESRKQIM NEFGGLKRSY 360 YMDPQPLHHF EWHLYEYEIN KCDACALYRL ELKLVDGKKN SKGKLSNDSV ADLQKQMGRL 420 TAEFPPDNNK RCIKGRPKVN VKVATVTSVN ANSAQNIAEQ ANDYGVGDEY NYLVGNLGDY 480 YI

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence Send to blast

MTGKRSKTNC RSASHKLFKD KAKNRVDDLQ GMLLDLQFAR KESRSSDVTL LEEQVNQMLR  60
EWKSELNEPS PASSLQQQGG TLGSFSSDIC RLLQLCDEED DATSKLAAPK PEPADQNMQA  120
GKTAVFQKGY NLVPGKAEQG FPLVDRCKDS SLVVGNNFDG STHLEYHQFD LQQEFGPNFS  180
GGFSDCPNYS GDGALDISTF IPTICPPPSA FLGPKCALWD CPRPAQGFDW FQDYCSSFHA  240
ALAFNEGPPG MNPVVRPGGI GLKDGLLFAA LSAKAGGKDV GIPECEGAAT AKSPWNAPEL  300
FDLAVLESET LREWLFFDKP RRAFESGNRK QRSLPDYNGR GWHESRKQIM NEFGGLKRSY  360
YMDPQPLHHF EWHLYEYEIN KCDACALYRL ELKLVDGKKN SKGKLSNDSV ADLQKQMGRL  420
TAEFPPDNNK RCIKGRPKVN VKVATVTSVN ANSAQNIAEQ ANDYGVGDEY NYLVGNLGDY  480
YI

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	AA49G00049

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006415643.1	0.0	transcription factor VOZ1 isoform X1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	V4MQP3	0.0	V4MQP3_EUTSA; Uncharacterized protein
STRING	XP_006415643.1	0.0	(Eutrema salsugineum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM6667	27	45

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]