PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA32G00931
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family EIL
Protein Properties Length: 561aa    MW: 64550.9 Da    PI: 5.8206
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA32G00931genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN35016e-153504131353
                 XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekv 99 
                 +el++rmw+d+m+lkrlke++k     ke  ++a+k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+gasd+Lr+WWk+kv
  AA32G00931  50 DELERRMWRDKMRLKRLKEQSKC----KEG-VDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKV 143
                 79*****************9996....787.9******************************************************************* PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--..----- CS
        EIN3 100 efdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqg.tppykk 197
                 +fdrngpaai+kyq +n++++ +++++     ++h+l+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWPtGke+ww++lgl+k+qg  ppykk
  AA32G00931 144 RFDRNGPAAIAKYQTENNLPGFHEGSNL-IGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGKEEWWPQLGLPKEQGsSPPYKK 241
                 **********************999988.9********************************************************************* PP

                 GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX..XXXXXXXXXXXXXXXXXXXX....XXXXX CS
        EIN3 198 phdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss..slrkqspkvtlsceqkedve....gkkes 290
                 phdlkkawkv+vLtavikhmsp+i++ir+l+rqsk+lqdkm+akes+++l+++nqee  +++++++s   s++ +s ++ +++ +++dve    +++++
  AA32G00931 242 PHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEIVARELYPESCplSSSGGSSSLLINDCSEYDVEgfdiEERKP 340
                 ******************************************************************663466669***************765522222 PP

                 X.XXXXXXXXXX.................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS
        EIN3 291 kikhvqavktta.................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353
                 +i      +                    +f+++rkrk k++ + +++ ++   tc+ sq+++se +++f++++s+++++
  AA32G00931 341 EIV----MNV-PsfgitkmeqfpvkeevtNFEFTRKRKLKNDVNITMERTG--FTCEYSQCPHSEISHGFHERSSRDNHQ 413
                 211....111.134556678888888988*********9998888888775..7************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048738.5E-12950298No hitNo description
Gene3DG3DSA:1.10.3180.101.3E-74172308IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.23E-61176301IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009723Biological Processresponse to ethylene
GO:0042742Biological Processdefense response to bacterium
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 561 aa     Download sequence    Send to blast
MMMFNEMGMY GNMDFFSSTS LGEIDVCPIP QTEEEPVVED DYTDDEIDVD ELERRMWRDK  60
MRLKRLKEQS KCKEGVDAAK QRQSQEQARR KKMSRAQDGI LKYMLKMMEV CKAQGFVYGI  120
IPEKGKPVTG ASDNLREWWK DKVRFDRNGP AAIAKYQTEN NLPGFHEGSN LIGPTPHTLQ  180
ELQDTTLGSL LSALMQHCDP PQRRFPLEKG VPPPWWPTGK EEWWPQLGLP KEQGSSPPYK  240
KPHDLKKAWK VGVLTAVIKH MSPDIAKIRK LVRQSKCLQD KMTAKESATW LAIINQEEIV  300
ARELYPESCP LSSSGGSSSL LINDCSEYDV EGFDIEERKP EIVMNVPSFG ITKMEQFPVK  360
EEVTNFEFTR KRKLKNDVNI TMERTGFTCE YSQCPHSEIS HGFHERSSRD NHQLACPFRN  420
NHLPYGAAKF HQVHNSVDLS GYGVPEDGQK MISELMTMYD RSNQTPSMAE THQTMAVNTK  480
PVQNQLNFNR NDGNLIEGSF FEDLTIPNNN NNIQINRNLM NNNNNNRFQL VFDSTQFDMA  540
SFDYRDDWDG VTKQQDVSIW F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A3e-841753082134Protein ETHYLENE INSENSITIVE 3
4zds_B3e-841753082134Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor acting as a positive regulator in the ethylene response pathway. Could bind the primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA32G00931
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020888534.10.0protein ETHYLENE INSENSITIVE 3
SwissprotQ9SLH00.0EIL1_ARATH; ETHYLENE INSENSITIVE 3-like 1 protein
TrEMBLR0I1810.0R0I181_9BRAS; Uncharacterized protein
STRINGBostr.19424s0573.1.p0.0(Boechera stricta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM21352879
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27050.10.0ETHYLENE-INSENSITIVE3-like 1
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Kim HG, et al.
    GDSL LIPASE1 modulates plant immunity through feedback regulation of ethylene signaling.
    Plant Physiol., 2013. 163(4): p. 1776-91
    [PMID:24170202]
  3. Zhang GB,Yi HY,Gong JM
    The Arabidopsis ethylene/jasmonic acid-NRT signaling module coordinates nitrate reallocation and the trade-off between growth and environmental adaptation.
    Plant Cell, 2014. 26(10): p. 3984-98
    [PMID:25326291]
  4. Wang J, et al.
    Arabidopsis ROOT HAIR DEFECTIVE3 is involved in nitrogen starvation-induced anthocyanin accumulation.
    J Integr Plant Biol, 2015. 57(8): p. 708-21
    [PMID:25494721]
  5. Qing D, et al.
    Quantitative and Functional Phosphoproteomic Analysis Reveals that Ethylene Regulates Water Transport via the C-Terminal Phosphorylation of Aquaporin PIP2;1 in Arabidopsis.
    Mol Plant, 2016. 9(1): p. 158-174
    [PMID:26476206]
  6. Poulios S,Vlachonasios KE
    Synergistic action of histone acetyltransferase GCN5 and receptor CLAVATA1 negatively affects ethylene responses in Arabidopsis thaliana.
    J. Exp. Bot., 2016. 67(3): p. 905-18
    [PMID:26596766]
  7. Shen X,Li Y,Pan Y,Zhong S
    Activation of HLS1 by Mechanical Stress via Ethylene-Stabilized EIN3 Is Crucial for Seedling Soil Emergence.
    Front Plant Sci, 2016. 7: p. 1571
    [PMID:27822221]
  8. Abozeid A, et al.
    Ethylene Improves Root System Development under Cadmium Stress by Modulating Superoxide Anion Concentration in Arabidopsis thaliana.
    Front Plant Sci, 2017. 8: p. 253
    [PMID:28286514]
  9. Feng Y, et al.
    Ethylene promotes root hair growth through coordinated EIN3/EIL1 and RHD6/RSL1 activity in Arabidopsis.
    Proc. Natl. Acad. Sci. U.S.A., 2017. 114(52): p. 13834-13839
    [PMID:29233944]
  10. Harkey AF, et al.
    Identification of Transcriptional and Receptor Networks That Control Root Responses to Ethylene.
    Plant Physiol., 2018. 176(3): p. 2095-2118
    [PMID:29259106]